RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 BLOC1S2Q6QNY1 142 aa18.17■□□□□ 0.5
DDB1-218ENST00000540784 PNMA1Q8ND90 353 aa18.17■□□□□ 0.5
DDB1-218ENST00000540784 DCAF4Q8WV16 495 aa18.17■□□□□ 0.5
DDB1-218ENST00000540784 CPA4Q9UI42 421 aa18.17■□□□□ 0.5
DDB1-218ENST00000540784 GPR25O00155 361 aa18.16■□□□□ 0.5
DDB1-218ENST00000540784 HSPA8P11142 646 aaKnown RBP18.16■□□□□ 0.5
DDB1-218ENST00000540784 SAMD1Q6SPF0 538 aaPredicted RBP18.16■□□□□ 0.5
DDB1-218ENST00000540784 C17orf99Q6UX52 265 aa18.16■□□□□ 0.5
DDB1-218ENST00000540784 FEM1BQ9UK73 627 aa18.16■□□□□ 0.5
DDB1-218ENST00000540784 WDR19Q8NEZ3 1342 aa18.16■□□□□ 0.5
DDB1-218ENST00000540784 CASTP20810 708 aaKnown RBP18.15■□□□□ 0.5
DDB1-218ENST00000540784 DSG3P32926 999 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 LBX1P52954 281 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 ANAPC15P60006 121 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 FGD1P98174 961 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
DDB1-218ENST00000540784 CCDC96Q2M329 555 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
DDB1-218ENST00000540784 NFXL1Q6ZNB6 911 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 PRPF38AQ8NAV1 312 aaKnown RBP18.15■□□□□ 0.5
DDB1-218ENST00000540784 GTF3C2Q8WUA4 911 aaPredicted RBP18.15■□□□□ 0.5
DDB1-218ENST00000540784 CHURC1Q8WUH1 139 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 LRRC2Q9BYS8 371 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 TM6SF1Q9BZW5 370 aa18.15■□□□□ 0.5
DDB1-218ENST00000540784 GPHNQ9NQX3 736 aaPredicted RBP18.15■□□□□ 0.5
DDB1-218ENST00000540784 PTPRFP10586 1907 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 TMEM232C9JQI7 657 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 SH2B2O14492 632 aaPredicted RBP18.14■□□□□ 0.49
DDB1-218ENST00000540784 FKTNO75072 461 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 PDHBP11177 359 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 CPA1P15085 419 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 LIFRP42702 1097 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 SP3Q02447 781 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 IKQ13123 557 aaPredicted RBP18.14■□□□□ 0.49
DDB1-218ENST00000540784 KCTD1Q719H9 257 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 CATIPQ7Z7H3 387 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 ANKRD13CQ8N6S4 541 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 UPF2Q9HAU5 1272 aaKnown RBP18.14■□□□□ 0.49
DDB1-218ENST00000540784 LY9Q9HBG7 655 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 SENP2Q9HC62 589 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 ZSWIM6Q9HCJ5 1215 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 FBXO28Q9NVF7 368 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 RBPJLQ9UBG7 517 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 CYP46A1Q9Y6A2 500 aa18.14■□□□□ 0.49
DDB1-218ENST00000540784 PCNTO95613 3336 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 LOC285556D6RIA3 1793 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 CCDC69A6NI79 296 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 RUFY3Q7L099 469 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 FAM160B2Q86V87 743 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 GPRC5AQ8NFJ5 357 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 ZNF296Q8WUU4 475 aaPredicted RBP18.13■□□□□ 0.49
DDB1-218ENST00000540784 KIFC2Q96AC6 838 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 SLF1Q9BQI6 1058 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 GPCPD1Q9NPB8 672 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 PPP1R9AQ9ULJ8 1098 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 RABGAP1Q9Y3P9 1069 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 MYPNQ86TC9 1320 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 ADGRA2Q96PE1 1338 aa18.13■□□□□ 0.49
DDB1-218ENST00000540784 SPDYE16A6NNV3 312 aaPredicted RBP18.12■□□□□ 0.49
DDB1-218ENST00000540784 PLA2G6O60733 806 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 SNHG28P0DPA3 235 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 BCRP11274 1271 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 STAT2P52630 851 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
DDB1-218ENST00000540784 LBX2Q6XYB7 198 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 SYNE3Q6ZMZ3 975 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 PAGR1Q9BTK6 254 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 C22orf23Q9BZE7 217 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 ADAMTS5Q9UNA0 930 aa18.12■□□□□ 0.49
DDB1-218ENST00000540784 CTDP1Q9Y5B0 961 aaPredicted RBP18.12■□□□□ 0.49
DDB1-218ENST00000540784 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
DDB1-218ENST00000540784 ZBED4O75132 1171 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 PARP1P09874 1014 aaKnown RBP18.11■□□□□ 0.49
DDB1-218ENST00000540784 KIF22Q14807 665 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 TTBK2Q6IQ55 1244 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 Q6ZUG5 572 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 MB21D1Q8N884 522 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 ATG4CQ96DT6 458 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 BACH2Q9BYV9 841 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 MORF4L1Q9UBU8 362 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 SLC12A7Q9Y666 1083 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
DDB1-218ENST00000540784 VWA5AO00534 786 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 GOLGA8HP0CJ92 632 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 FDX1P10109 184 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 SLC16A2P36021 539 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 TROAPQ12815 778 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 ARHGEF6Q15052 776 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 FAM110CQ1W6H9 321 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 Q3C1V9 767 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 ASPRV1Q53RT3 343 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 POTEEQ6S8J3 1075 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 BTNL9Q6UXG8 535 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 RASGRP2Q7LDG7 609 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 ZNF654Q8IZM8 581 aa18.1■□□□□ 0.49
DDB1-218ENST00000540784 NUP133Q8WUM0 1156 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms