RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 C1orf53Q5VUE5 145 aa15.02■□□□□ -0
COPS7A-211ENST00000540408 SIAH1Q8IUQ4 282 aa15.02■□□□□ -0
COPS7A-211ENST00000540408 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.02■□□□□ -0
COPS7A-211ENST00000540408 BADQ92934 168 aa15.02■□□□□ -0
COPS7A-211ENST00000540408 FERMT2Q96AC1 680 aa15.02■□□□□ -0
COPS7A-211ENST00000540408 GUCD1Q96NT3 240 aa15.02■□□□□ -0
COPS7A-211ENST00000540408 XPNPEP3Q9NQH7 507 aa15.02■□□□□ -0
COPS7A-211ENST00000540408 TACC3Q9Y6A5 838 aa15.02■□□□□ -0
COPS7A-211ENST00000540408 ZNF236Q9UL36 1845 aa15.01□□□□□ -0.01
COPS7A-211ENST00000540408 EEF2P13639 858 aaKnown RBP15.01□□□□□ -0.01
COPS7A-211ENST00000540408 TMEM132BQ14DG7 1078 aa15.01□□□□□ -0.01
COPS7A-211ENST00000540408 FAM47AQ5JRC9 791 aa15.01□□□□□ -0.01
COPS7A-211ENST00000540408 RIOX2Q8IUF8 465 aa15.01□□□□□ -0.01
COPS7A-211ENST00000540408 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
COPS7A-211ENST00000540408 DIS3Q9Y2L1 958 aaKnown RBP15.01□□□□□ -0.01
COPS7A-211ENST00000540408 SLC4A4Q9Y6R1 1079 aa15.01□□□□□ -0.01
COPS7A-211ENST00000540408 ATP5JP18859 108 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 STAT3P40763 770 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 SMAD3P84022 425 aaKnown RBP15□□□□□ -0.01
COPS7A-211ENST00000540408 UBE3CQ15386 1083 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 C16orf86Q6ZW13 317 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 CLEC10AQ8IUN9 316 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 TINF2Q9BSI4 451 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 PDLIM7Q9NR12 457 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 ADAMTS5Q9UNA0 930 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 PHF24Q9UPV7 400 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 CNPY2Q9Y2B0 182 aa15□□□□□ -0.01
COPS7A-211ENST00000540408 PGK2P07205 417 aa14.99□□□□□ -0.01
COPS7A-211ENST00000540408 AKR1A1P14550 325 aa14.99□□□□□ -0.01
COPS7A-211ENST00000540408 TLE2Q04725 743 aa14.99□□□□□ -0.01
COPS7A-211ENST00000540408 CDX2Q99626 313 aaPredicted RBP14.99□□□□□ -0.01
COPS7A-211ENST00000540408 HAUS7Q99871 368 aa14.99□□□□□ -0.01
COPS7A-211ENST00000540408 COL25A1Q9BXS0 654 aaPredicted RBP14.99□□□□□ -0.01
COPS7A-211ENST00000540408 SEMA6BQ9H3T3 888 aa14.99□□□□□ -0.01
COPS7A-211ENST00000540408 PPP1R9AQ9ULJ8 1098 aa14.99□□□□□ -0.01
COPS7A-211ENST00000540408 CYP2D7A0A087X1C5 515 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 TRIM43BA6NCK2 446 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 VWA5AO00534 786 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 CLTBP09497 229 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 RAG1P15918 1043 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 ZNF792Q3KQV3 632 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 C9orf50Q5SZB4 431 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 NUP133Q8WUM0 1156 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 TRIM43Q96BQ3 446 aaPredicted RBP14.98□□□□□ -0.01
COPS7A-211ENST00000540408 FBXO28Q9NVF7 368 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 ARPP21Q9UBL0 812 aaPredicted RBP14.98□□□□□ -0.01
COPS7A-211ENST00000540408 CTDP1Q9Y5B0 961 aaPredicted RBP14.98□□□□□ -0.01
COPS7A-211ENST00000540408 RLFQ13129 1914 aa14.98□□□□□ -0.01
COPS7A-211ENST00000540408 ZBED9Q6R2W3 1325 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 PGK1P00558 417 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 SLFNL1Q499Z3 407 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 FAM83BQ5T0W9 1011 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 CTR9Q6PD62 1173 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 SH3RF1Q7Z6J0 888 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 MSL3Q8N5Y2 521 aaKnown RBP14.97□□□□□ -0.01
COPS7A-211ENST00000540408 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 MKNK2Q9HBH9 465 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 ZBTB40Q9NUA8 1239 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 TMEM39AQ9NV64 488 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 COG6Q9Y2V7 657 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 A0A0C4DFX4 3053 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 A0A0G2JMZ2 1700 aa14.97□□□□□ -0.01
COPS7A-211ENST00000540408 DNAH12Q6ZR08 3092 aa14.96□□□□□ -0.01
COPS7A-211ENST00000540408 MYH8P13535 1937 aa14.96□□□□□ -0.01
COPS7A-211ENST00000540408 DCDC2CA8MYV0 355 aa14.96□□□□□ -0.01
COPS7A-211ENST00000540408 PQBP1O60828 265 aaKnown RBP14.96□□□□□ -0.01
COPS7A-211ENST00000540408 SIRT2Q8IXJ6 389 aa14.96□□□□□ -0.01
COPS7A-211ENST00000540408 MAFAQ8NHW3 353 aaPredicted RBP14.96□□□□□ -0.01
COPS7A-211ENST00000540408 RNPC3Q96LT9 517 aaKnown RBP14.96□□□□□ -0.01
COPS7A-211ENST00000540408 SLF1Q9BQI6 1058 aa14.96□□□□□ -0.01
COPS7A-211ENST00000540408 TSEN34Q9BSV6 310 aaKnown RBP14.96□□□□□ -0.01
COPS7A-211ENST00000540408 TEX13BQ9BXU2 312 aa14.96□□□□□ -0.01
COPS7A-211ENST00000540408 STARD7Q9NQZ5 370 aa14.96□□□□□ -0.01
COPS7A-211ENST00000540408 ZNF214Q9UL59 606 aaPredicted RBP14.96□□□□□ -0.01
COPS7A-211ENST00000540408 FAM184BQ9ULE4 1060 aa14.96□□□□□ -0.01
COPS7A-211ENST00000540408 TMEM265A0A087WTH1 108 aa14.95□□□□□ -0.02
COPS7A-211ENST00000540408 A0A1W2PQ45 241 aaPredicted RBP14.95□□□□□ -0.02
COPS7A-211ENST00000540408 A0A1W2PQY0 241 aa14.95□□□□□ -0.02
COPS7A-211ENST00000540408 ZBED4O75132 1171 aa14.95□□□□□ -0.02
COPS7A-211ENST00000540408 ZNF865P0CJ78 1059 aaPredicted RBP14.95□□□□□ -0.02
COPS7A-211ENST00000540408 FPGSQ05932 587 aa14.95□□□□□ -0.02
COPS7A-211ENST00000540408 PRPF38AQ8NAV1 312 aaKnown RBP14.95□□□□□ -0.02
COPS7A-211ENST00000540408 TOX2Q96NM4 488 aa14.95□□□□□ -0.02
COPS7A-211ENST00000540408 LRRCC1Q9C099 1032 aa14.95□□□□□ -0.02
COPS7A-211ENST00000540408 PUS7LQ9H0K6 701 aaKnown RBP14.95□□□□□ -0.02
COPS7A-211ENST00000540408 SPC25Q9HBM1 224 aa14.95□□□□□ -0.02
COPS7A-211ENST00000540408 ZNF287Q9HBT7 754 aa14.95□□□□□ -0.02
COPS7A-211ENST00000540408 SYNGAP1Q96PV0 1343 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 LTBP2Q14767 1821 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 MOXD2PA6NHM9 499 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 F5H6K3 240 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 SMIM22K7EJ46 135 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 KIAA0355O15063 1070 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 TAL1P17542 331 aaPredicted RBP14.94□□□□□ -0.02
COPS7A-211ENST00000540408 SLC4A3P48751 1232 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 ACLYP53396 1101 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 KLRC3Q07444 240 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 SBK1Q52WX2 424 aa14.94□□□□□ -0.02
COPS7A-211ENST00000540408 SNRNP48Q6IEG0 339 aaKnown RBP14.94□□□□□ -0.02
COPS7A-211ENST00000540408 GIMAP6Q6P9H5 292 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms