RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 TFIP11Q9UBB9 837 aaKnown RBP7.99□□□□□ -1.13
CDH19-203ENST00000540086 ISY1Q9ULR0 285 aaKnown RBP7.99□□□□□ -1.13
CDH19-203ENST00000540086 A0A1W2PRG0 241 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 PHF20L1A8MW92 1017 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 SNHG28P0DPA3 235 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 SCG2P13521 617 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 CAP2P40123 477 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 ECE1P42892 770 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 GNL2Q13823 731 aaKnown RBP7.98□□□□□ -1.13
CDH19-203ENST00000540086 ASPRV1Q53RT3 343 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 SLFN13Q68D06 897 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 KCTD1Q719H9 257 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 USP48Q86UV5 1035 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 ACER1Q8TDN7 264 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 GPKOWQ92917 476 aaPredicted RBP eCLIP7.98□□□□□ -1.13
CDH19-203ENST00000540086 MKL1Q969V6 931 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 L3MBTL3Q96JM7 780 aaPredicted RBP7.98□□□□□ -1.13
CDH19-203ENST00000540086 LZTS2Q9BRK4 669 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 SPZ1Q9BXG8 430 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 VAT1LQ9HCJ6 419 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 LMBRD1Q9NUN5 540 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 FZD1Q9UP38 647 aa7.98□□□□□ -1.13
CDH19-203ENST00000540086 TRAK2O60296 914 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 MMP1P03956 469 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 SLC1A4P43007 532 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 KRT85P78386 507 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 ZNF543Q08ER8 600 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 PFKFB3Q16875 520 aaPredicted RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 TTBK2Q6IQ55 1244 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 HOMER1Q86YM7 354 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 DIS3L2Q8IYB7 885 aaKnown RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 NUP88Q99567 741 aaPredicted RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 FTOQ9C0B1 505 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDH19-203ENST00000540086 GLTPD2A6NH11 291 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 BTBD18B2RXH4 712 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 ADM5C9JUS6 153 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 F5H6K3 240 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 NDUFB10O96000 172 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 XBP1P17861 261 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 INPP5BP32019 993 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 SLC16A2P36021 539 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 CEBPZQ03701 1054 aaKnown RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 KLRC3Q07444 240 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 MKRN4PQ13434 485 aaPredicted RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 SAFBQ15424 915 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDH19-203ENST00000540086 ZYXQ15942 572 aaKnown RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 DCAF15Q66K64 600 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 HEATR3Q7Z4Q2 680 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 SPICE1Q8N0Z3 855 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 OXER1Q8TDS5 423 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 RRP36Q96EU6 259 aaKnown RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 PIGSQ96S52 555 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 GLIS2Q9BZE0 524 aaPredicted RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 ARHGEF10LQ9HCE6 1279 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 RBM27Q9P2N5 1060 aaKnown RBP7.97□□□□□ -1.13
CDH19-203ENST00000540086 PPP2R3BQ9Y5P8 575 aa7.97□□□□□ -1.13
CDH19-203ENST00000540086 GADD45BO75293 160 aaPredicted RBP7.96□□□□□ -1.14
CDH19-203ENST00000540086 ECM2O94769 699 aaPredicted RBP7.96□□□□□ -1.14
CDH19-203ENST00000540086 ASNSP08243 561 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 PTMSP20962 102 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 EPHX2P34913 555 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 NR5A1Q13285 461 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 PRKG1Q13976 671 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 GPATCH4Q5T3I0 446 aaKnown RBP7.96□□□□□ -1.14
CDH19-203ENST00000540086 MYSM1Q5VVJ2 828 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 WWC2Q6AWC2 1192 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 BRAPQ7Z569 592 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 ADGRF4Q8IZF3 695 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 TMEM87AQ8NBN3 555 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 RGS22Q8NE09 1264 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 GMCL1P1Q8NEA9 526 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 DCAF4Q8WV16 495 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 DCPSQ96C86 337 aaKnown RBP7.96□□□□□ -1.14
CDH19-203ENST00000540086 USP28Q96RU2 1077 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 WRNIP1Q96S55 665 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 PHF20Q9BVI0 1012 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 ZNF341Q9BYN7 854 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 SBF1O95248 1867 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 PITPNM2Q9BZ72 1349 aa7.96□□□□□ -1.14
CDH19-203ENST00000540086 ZC3H4Q9UPT8 1303 aaKnown RBP7.96□□□□□ -1.14
CDH19-203ENST00000540086 STXBP3O00186 592 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 CTNND1O60716 968 aaKnown RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 U2AF2P26368 475 aaKnown RBP eCLIP7.95□□□□□ -1.14
CDH19-203ENST00000540086 SMARCA1P28370 1054 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 NLRP5P59047 1200 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 EAPPQ56P03 285 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 KIAA1755Q5JYT7 1200 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 USP50Q70EL3 339 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 NOSTRINQ8IVI9 506 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 SULF1Q8IWU6 871 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 LEO1Q8WVC0 666 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 ZKSCAN4Q969J2 545 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 HOOK2Q96ED9 719 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 GMCL1Q96IK5 515 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 SPATA32Q96LK8 384 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 ZNF396Q96N95 335 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 RIOX1Q9H6W3 641 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 JMJD4Q9H9V9 463 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 SEC63Q9UGP8 760 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms