RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 RCSD1Q6JBY9 416 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 CYB5R4Q7L1T6 521 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 MB21D2Q8IYB1 491 aaPredicted RBP8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 LRRC47Q8N1G4 583 aaKnown RBP8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 GMCL1P1Q8NEA9 526 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 LPAR1Q92633 364 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 MKL1Q969V6 931 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 PARK7Q99497 189 aaKnown RBP8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 R3HDMLQ9H3Y0 253 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 GOPCQ9HD26 462 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 CLIP2Q9UDT6 1046 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 STX8Q9UNK0 236 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 ZNF236Q9UL36 1845 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 TNKSO95271 1327 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 WDR46O15213 610 aaKnown RBP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 TLR2O60603 784 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 NDUFB10O96000 172 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 HSPA4P34932 840 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 CTCFP49711 727 aaPredicted RBP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 ANTXR2P58335 489 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 TRDNQ13061 729 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 PABPC4Q13310 644 aaKnown RBP eCLIP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 COL9A3Q14050 684 aaPredicted RBP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 C8orf34Q49A92 452 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 RASGRP2Q7LDG7 609 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 RALYLQ86SE5 291 aaKnown RBP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 IQCA1Q86XH1 822 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 RASEFQ8IZ41 740 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 SPICE1Q8N0Z3 855 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 ENAHQ8N8S7 591 aaPredicted RBP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 NCOA7Q8NI08 942 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 KCNB2Q92953 911 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 ZSCAN10Q96SZ4 725 aaPredicted RBP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 ZKSCAN3Q9BRR0 538 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 ASCC2Q9H1I8 757 aaPredicted RBP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 RPAP3Q9H6T3 665 aaPredicted RBP8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 ZFYVE28Q9HCC9 887 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 ZSWIM5Q9P217 1185 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 PNMA3Q9UL41 463 aa8.22□□□□□ -1.09
LPCAT3-209ENST00000540060 USP17L15C9J2P7 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP17L13C9JLJ4 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP17L11C9JVI0 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP17L18D6R9N7 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP17L22D6RA61 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP17L17D6RBQ6 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP17L19D6RCP7 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP17L20D6RJB6 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 F5H6K3 240 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 GPR25O00155 361 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 BCRP11274 1271 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 TOP1P11387 765 aaKnown RBP8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 LBX1P52954 281 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 HERVK_113P62684 666 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 IRX3P78415 501 aaPredicted RBP8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 KLRC3Q07444 240 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP17L24Q0WX57 530 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 SEC23AQ15436 765 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 ADCK5Q3MIX3 580 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 TSGA10IPQ3SY00 556 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 FAM83BQ5T0W9 1011 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 CATSPERGQ6ZRH7 1159 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 DGKHQ86XP1 1220 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 SMCR8Q8TEV9 937 aaPredicted RBP8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 GMCL1Q96IK5 515 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 TTC14Q96N46 770 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 NUP88Q99567 741 aaPredicted RBP8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 TMEM47Q9BQJ4 181 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 UBAC1Q9BSL1 405 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 USP26Q9BXU7 913 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 TANGO6Q9C0B7 1094 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 SNX14Q9Y5W7 946 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 MYPNQ86TC9 1320 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 PLXNA1Q9UIW2 1896 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 CENPFP49454 3210 aa8.21□□□□□ -1.1
LPCAT3-209ENST00000540060 SPDYE16A6NNV3 312 aaPredicted RBP8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 RAD21O60216 631 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 ZKSCAN1P17029 563 aaPredicted RBP8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 OSBPP22059 807 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 KRT32Q14532 448 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 CCDC178Q5BJE1 867 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 POTEEQ6S8J3 1075 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 C17orf99Q6UX52 265 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 LBX2Q6XYB7 198 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 ZNF296Q8WUU4 475 aaPredicted RBP8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 ANKS1AQ92625 1134 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 P2RX7Q99572 595 aaKnown RBP8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 CPA4Q9UI42 421 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 LCTP09848 1927 aa8.2□□□□□ -1.1
LPCAT3-209ENST00000540060 ZNFX1Q9P2E3 1918 aaKnown RBP8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 DOCK3Q8IZD9 2030 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 PRC1O43663 620 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 FKTNO75072 461 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 CNMDO75829 334 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 FLOT1O75955 427 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 SNHG28P0DPA3 235 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 PDHBP11177 359 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 BMP3P12645 472 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 MCM5P33992 734 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 GCLCP48506 637 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms