RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 DNAJB2P25686 324 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 ADORA2AP29274 412 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 FPGSQ05932 587 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 RAB3GAP1Q15042 981 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 ABCB5Q2M3G0 1257 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 TMED8Q6PL24 325 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-219ENST00000539952 MB21D1Q8N884 522 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 IL27Q8NEV9 243 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 SLC39A7Q92504 469 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 TIFAQ96CG3 184 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 TSEN34Q9BSV6 310 aaKnown RBP7.24□□□□□ -1.25
CPSF7-219ENST00000539952 C1QTNF1Q9BXJ1 281 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 MOV10L1Q9BXT6 1211 aaKnown RBP7.24□□□□□ -1.25
CPSF7-219ENST00000539952 SPATC1LQ9H0A9 340 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 DNAJC18Q9H819 358 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 SERPINB13Q9UIV8 391 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 PHF24Q9UPV7 400 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 PLXNB2O15031 1838 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 FLT1P17948 1338 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 DOCK2Q92608 1830 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 SPDYE16A6NNV3 312 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-219ENST00000539952 COBLO75128 1261 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 TIMP1P01033 207 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 CT47B1P0C2W7 299 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-219ENST00000539952 RARBP10826 455 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 VCAM1P19320 739 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 ERCC3P19447 782 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 MCAMP43121 646 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 MTX1Q13505 466 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 ZYXQ15942 572 aaKnown RBP7.23□□□□□ -1.25
CPSF7-219ENST00000539952 TTC39AQ5SRH9 613 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 PRAMEF19Q5SWL8 479 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 ANO1Q5XXA6 986 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 PI16Q6UXB8 463 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 ANKRD33Q7Z3H0 272 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 SLC44A5Q8NCS7 719 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 NUP133Q8WUM0 1156 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 PPM1EQ8WY54 764 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 BACH2Q9BYV9 841 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 EHD4Q9H223 541 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 RPAP3Q9H6T3 665 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-219ENST00000539952 GPR108Q9NPR9 543 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 THEGQ9P2T0 379 aa7.23□□□□□ -1.25
CPSF7-219ENST00000539952 NOB1Q9ULX3 412 aaKnown RBP7.23□□□□□ -1.25
CPSF7-219ENST00000539952 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
CPSF7-219ENST00000539952 MYO9BQ13459 2157 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 UNC80Q8N2C7 3258 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 SLC25A27O95847 323 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 FCER1AP12319 257 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 ITGB8P26012 769 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 USP5P45974 858 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 EPHB4P54760 987 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 SLFN5Q08AF3 891 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 FAAP100Q0VG06 881 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 MAP3K12Q12852 859 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 PPIGQ13427 754 aaKnown RBP eCLIP7.22□□□□□ -1.257e-8■■■□□ 16.3
CPSF7-219ENST00000539952 CAMK2BQ13554 666 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 AAK1Q2M2I8 961 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 MFSD5Q6N075 450 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 CCDC129Q6ZRS4 1044 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 NCAPG2Q86XI2 1143 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 TMEM199Q8N511 208 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 USP38Q8NB14 1042 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 ACER1Q8TDN7 264 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 ADAMTS19Q8TE59 1207 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 ARHGAP45Q92619 1136 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 MAML3Q96JK9 1138 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 ZNF512BQ96KM6 892 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-219ENST00000539952 UHRF1Q96T88 793 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-219ENST00000539952 XPNPEP3Q9NQH7 507 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 SMC4Q9NTJ3 1288 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 SAP30BPQ9UHR5 308 aaKnown RBP7.22□□□□□ -1.25
CPSF7-219ENST00000539952 MSRAQ9UJ68 235 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 MYH13Q9UKX3 1938 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 ZNF521Q96K83 1311 aa7.22□□□□□ -1.25
CPSF7-219ENST00000539952 LOC285556D6RIA3 1793 aa7.21□□□□□ -1.25
CPSF7-219ENST00000539952 MOXD2PA6NHM9 499 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 DPYSL4O14531 572 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 PQBP1O60828 265 aaKnown RBP7.21□□□□□ -1.26
CPSF7-219ENST00000539952 CYP2E1P05181 493 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-219ENST00000539952 POLR3DP05423 398 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-219ENST00000539952 C7P10643 843 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 AKR1A1P14550 325 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 CYP7A1P22680 504 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 PLS1Q14651 629 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 RAB30Q15771 203 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 SHROOM1Q2M3G4 852 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-219ENST00000539952 FAM47AQ5JRC9 791 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 PLPP6Q8IY26 295 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.21□□□□□ -1.262e-7■■■■□ 22.5
CPSF7-219ENST00000539952 TINF2Q9BSI4 451 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 STARD7Q9NQZ5 370 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 SNRKQ9NRH2 765 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 DAXXQ9UER7 740 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-219ENST00000539952 ELP1O95163 1332 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 MROH7Q68CQ1 1323 aa7.21□□□□□ -1.26
CPSF7-219ENST00000539952 PKD1L2Q7Z442 2459 aa7.2□□□□□ -1.26
CPSF7-219ENST00000539952 A0A1W2PQ45 241 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-219ENST00000539952 A0A1W2PQY0 241 aa7.2□□□□□ -1.26
CPSF7-219ENST00000539952 PGK1P00558 417 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms