RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
DDB1-216ENST00000539739 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
DDB1-216ENST00000539739 GOLGA8BA8MQT2 603 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 PARP1P09874 1014 aaKnown RBP17.99■□□□□ 0.47
DDB1-216ENST00000539739 SNHG28P0DPA3 235 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 KIF5BP33176 963 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 SREBF2Q12772 1141 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 PABPC4Q13310 644 aaKnown RBP eCLIP17.99■□□□□ 0.47
DDB1-216ENST00000539739 DGKZQ13574 1117 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 ASPRV1Q53RT3 343 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 KIAA1755Q5JYT7 1200 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 GPATCH4Q5T3I0 446 aaKnown RBP17.99■□□□□ 0.47
DDB1-216ENST00000539739 MYL10Q9BUA6 226 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 LIMCH1Q9UPQ0 1083 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 AGTPBP1Q9UPW5 1226 aa17.99■□□□□ 0.47
DDB1-216ENST00000539739 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
DDB1-216ENST00000539739 METAP2P50579 478 aaKnown RBP eCLIP17.98■□□□□ 0.476e-8■□□□□ 10.7
DDB1-216ENST00000539739 FAM83BQ5T0W9 1011 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 REM2Q8IYK8 340 aaPredicted RBP17.98■□□□□ 0.47
DDB1-216ENST00000539739 BRI3BPQ8WY22 251 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 RPAP3Q9H6T3 665 aaPredicted RBP17.98■□□□□ 0.47
DDB1-216ENST00000539739 TESPA1A2RU30 521 aaPredicted RBP17.98■□□□□ 0.47
DDB1-216ENST00000539739 GOLGA8AA7E2F4 631 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L15C9J2P7 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L13C9JLJ4 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L11C9JVI0 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L18D6R9N7 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L22D6RA61 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L17D6RBQ6 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L19D6RCP7 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L20D6RJB6 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 PDIA3P30101 505 aaKnown RBP17.98■□□□□ 0.47
DDB1-216ENST00000539739 GNAQP50148 359 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 ZNF543Q08ER8 600 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 USP17L24Q0WX57 530 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 GRM4Q14833 912 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 PPP2R5BQ15173 497 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 OTUD7BQ6GQQ9 843 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 KCTD1Q719H9 257 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 FANCBQ8NB91 859 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
DDB1-216ENST00000539739 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
DDB1-216ENST00000539739 TANGO6Q9C0B7 1094 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 TPCN1Q9ULQ1 816 aa17.98■□□□□ 0.47
DDB1-216ENST00000539739 FRMPD2Q68DX3 1309 aaPredicted RBP17.97■□□□□ 0.47
DDB1-216ENST00000539739 CCDC196A0A1B0GTZ2 297 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 RXRAP19793 462 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 VEGFBP49765 207 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 KIF23Q02241 960 aaPredicted RBP17.97■□□□□ 0.47
DDB1-216ENST00000539739 IKQ13123 557 aaPredicted RBP17.97■□□□□ 0.47
DDB1-216ENST00000539739 MOGSQ13724 837 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 RTN1Q16799 776 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 TREML2Q5T2D2 321 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 RAB11FIP4Q86YS3 637 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 CCDC144CPQ8IYA2 1237 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 CHURC1Q8WUH1 139 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
DDB1-216ENST00000539739 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
DDB1-216ENST00000539739 FEM1BQ9UK73 627 aa17.97■□□□□ 0.47
DDB1-216ENST00000539739 PTPRFP10586 1907 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 TMEM232C9JQI7 657 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 HOXA7P31268 230 aaPredicted RBP17.96■□□□□ 0.47
DDB1-216ENST00000539739 MAP2K2P36507 400 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 CATSPERGQ6ZRH7 1159 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 ANKRD23Q86SG2 305 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 FAM160B2Q86V87 743 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 GPCPD1Q9NPB8 672 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 SH2B1Q9NRF2 756 aaPredicted RBP17.96■□□□□ 0.47
DDB1-216ENST00000539739 MAD2L2Q9UI95 211 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 PNMA3Q9UL41 463 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 SLC45A1Q9Y2W3 748 aa17.96■□□□□ 0.47
DDB1-216ENST00000539739 PALM3A6NDB9 673 aaPredicted RBP17.95■□□□□ 0.46
DDB1-216ENST00000539739 BTBD19C9JJ37 291 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 AOC2O75106 756 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 FLOT1O75955 427 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 GOLGA8HP0CJ92 632 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 OSBPP22059 807 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 TM4SF4P48230 202 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 STAT2P52630 851 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 CCT2P78371 535 aaKnown RBP17.95■□□□□ 0.46
DDB1-216ENST00000539739 IRX3P78415 501 aaPredicted RBP17.95■□□□□ 0.46
DDB1-216ENST00000539739 STK3Q13188 491 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 GPAT2Q6NUI2 795 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 RASGRP2Q7LDG7 609 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 LZTS2Q9BRK4 669 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 HPS5Q9UPZ3 1129 aa17.95■□□□□ 0.46
DDB1-216ENST00000539739 KLRF2D3W0D1 207 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 PDHXO00330 501 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 PLA2G6O60733 806 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 PFKFB2O60825 505 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 ME3Q16798 604 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 PTPN18Q99952 460 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 ZCCHC17Q9NP64 241 aaKnown RBP17.94■□□□□ 0.46
DDB1-216ENST00000539739 DHX16O60231 1041 aaKnown RBP17.94■□□□□ 0.46
DDB1-216ENST00000539739 CD2BP2O95400 341 aaKnown RBP17.94■□□□□ 0.46
DDB1-216ENST00000539739 COG2Q14746 738 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 CPLX2Q6PUV4 134 aaKnown RBP17.94■□□□□ 0.46
DDB1-216ENST00000539739 IFNL1Q8IU54 200 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 FAM43AQ8N2R8 423 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 STAG2Q8N3U4 1231 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms