RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-210	ENST00000539303	C7orf69	Q9H7B7	122 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	GFOD1	Q9NXC2	390 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	LRP2BP	Q9P2M1	347 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	FBXL21	Q9UKT6	434 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	SUGT1	Q9Y2Z0	365 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	PPM1G	O15355	546 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	ETV3	P41162	512 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	GYS2	P54840	703 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	PAOX	Q6QHF9	649 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	C16orf86	Q6ZW13	317 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	ZNF765	Q7L2R6	523 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	FILIP1	Q7Z7B0	1213 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	LRRC47	Q8N1G4	583 aa	Known RBP	4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	FBXL6	Q8N531	539 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	BTN2A2	Q8WVV5	523 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	FBXL18	Q96ME1	805 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	TBC1D32	Q96NH3	1257 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	EPN3	Q9H201	632 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	CGGBP1	Q9UFW8	167 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	PCDHB12	Q9Y5F1	795 aa		4.56	□□□□□ -1.68
SNHG1-210	ENST00000539303	BLACE	A4D250	179 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	WASH4P	A8MWX3	477 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	DHX15	O43143	795 aa	Known RBP	4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	VAMP4	O75379	141 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	KCNH1	O95259	989 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	RAPGEF3	O95398	923 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	PRAMEF1	O95521	474 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	CAPNS1	P04632	268 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	ITGA4	P13612	1032 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	HSP90B1	P14625	803 aa	Known RBP	4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	GSK3A	P49840	483 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	ZNF143	P52747	638 aa	Predicted RBP	4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	RNF4	P78317	190 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	KCNMA1	Q12791	1236 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	PRSS53	Q2L4Q9	553 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	ANKRD39	Q53RE8	183 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	DALRD3	Q5D0E6	543 aa	Known RBP	4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	TMEM67	Q5HYA8	995 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	GPAT2	Q6NUI2	795 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	ZAR1	Q86SH2	424 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	FIBCD1	Q8N539	461 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	DTWD2	Q8NBA8	298 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	BVES	Q8NE79	360 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	ZSWIM2	Q8NEG5	633 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	KISS1R	Q969F8	398 aa	Predicted RBP	4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	TP53INP1	Q96A56	240 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	MRGPRX3	Q96LB0	322 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	MFSD14A	Q96MC6	490 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	ZDHHC15	Q96MV8	337 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	FEZ1	Q99689	392 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	FAM83C	Q9BQN1	747 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	AARSD1	Q9BTE6	412 aa	Known RBP	4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	ASPN	Q9BXN1	380 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	GBP3	Q9H0R5	595 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	IFT57	Q9NWB7	429 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	WHRN	Q9P202	907 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	AKT3	Q9Y243	479 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	EMC9	Q9Y3B6	208 aa		4.55	□□□□□ -1.68
SNHG1-210	ENST00000539303	TRBV23-1	A0A0A0MS06	115 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	TRAV20	A0A0B4J274	112 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303		H0Y8X5	98 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	RNF225	M0QZC1	329 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	AGRP	O00253	132 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	PRODH	O43272	600 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	PPM1B	O75688	479 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	F13B	P05160	661 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	CTSK	P43235	329 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	TNK2	Q07912	1038 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	CYP4F3	Q08477	520 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	PTPRO	Q16827	1216 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	SFRP5	Q5T4F7	317 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	CLEC10A	Q8IUN9	316 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	TRIM59	Q8IWR1	403 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	DHX37	Q8IY37	1157 aa	Known RBP	4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	ARHGEF39	Q8N4T4	335 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	FAM181A	Q8N9Y4	354 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	OSBP2	Q969R2	916 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	SGSM3	Q96HU1	749 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	CLUHP3	Q96NS8	147 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	MCMBP	Q9BTE3	642 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	IER2	Q9BTL4	223 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	CWC22	Q9HCG8	908 aa	Known RBP	4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	TPSG1	Q9NRR2	321 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	RAX	Q9Y2V3	346 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	MRPS23	Q9Y3D9	190 aa	Known RBP	4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	CAPN6	Q9Y6Q1	641 aa		4.54	□□□□□ -1.68
SNHG1-210	ENST00000539303	IQCA1L	A6NCM1	817 aa		4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	IRS4	O14654	1257 aa	Predicted RBP	4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	CLSTN1	O94985	981 aa		4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	NAT2	P11245	290 aa		4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	PABPC1	P11940	636 aa	Known RBP	4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	CDK11B	P21127	795 aa	Known RBP	4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	GATA4	P43694	442 aa		4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	MASP1	P48740	699 aa		4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	NMI	Q13287	307 aa	Predicted RBP	4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.53	□□□□□ -1.68
SNHG1-210	ENST00000539303	TCEA2	Q15560	299 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms