RNA–Protein interactions for RNA: ENST00000539010.5

PDE4C-204, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-204ENST00000539010 ADD1P35611 737 aaKnown RBP16.49■□□□□ 0.23
PDE4C-204ENST00000539010 ZNF543Q08ER8 600 aa16.49■□□□□ 0.23
PDE4C-204ENST00000539010 SAPCD2Q86UD0 394 aa16.49■□□□□ 0.23
PDE4C-204ENST00000539010 C12orf42Q96LP6 360 aa16.49■□□□□ 0.23
PDE4C-204ENST00000539010 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
PDE4C-204ENST00000539010 MAD2L2Q9UI95 211 aa16.49■□□□□ 0.23
PDE4C-204ENST00000539010 KCNH4Q9UQ05 1017 aa16.49■□□□□ 0.23
PDE4C-204ENST00000539010 IRF6O14896 467 aa16.48■□□□□ 0.23
PDE4C-204ENST00000539010 WDR46O15213 610 aaKnown RBP16.48■□□□□ 0.23
PDE4C-204ENST00000539010 CDC27P30260 824 aa16.48■□□□□ 0.23
PDE4C-204ENST00000539010 SH3D19Q5HYK7 790 aa16.48■□□□□ 0.23
PDE4C-204ENST00000539010 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
PDE4C-204ENST00000539010 CNKSR2Q8WXI2 1034 aa16.48■□□□□ 0.23
PDE4C-204ENST00000539010 WNK4Q96J92 1243 aa16.48■□□□□ 0.23
PDE4C-204ENST00000539010 IPO9Q96P70 1041 aaKnown RBP16.48■□□□□ 0.23
PDE4C-204ENST00000539010 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
PDE4C-204ENST00000539010 ABT1Q9ULW3 272 aaKnown RBP16.48■□□□□ 0.23
PDE4C-204ENST00000539010 TLL2Q9Y6L7 1015 aa16.48■□□□□ 0.23
PDE4C-204ENST00000539010 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
PDE4C-204ENST00000539010 ZBTB48P10074 688 aaPredicted RBP16.47■□□□□ 0.23
PDE4C-204ENST00000539010 SMARCA1P28370 1054 aa16.47■□□□□ 0.23
PDE4C-204ENST00000539010 HMGCS2P54868 508 aa16.47■□□□□ 0.23
PDE4C-204ENST00000539010 SNAPC2Q13487 334 aa16.47■□□□□ 0.23
PDE4C-204ENST00000539010 TMTC3Q6ZXV5 915 aa16.47■□□□□ 0.23
PDE4C-204ENST00000539010 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
PDE4C-204ENST00000539010 PTPRFP10586 1907 aa16.47■□□□□ 0.23
PDE4C-204ENST00000539010 FRMPD2Q68DX3 1309 aaPredicted RBP16.47■□□□□ 0.23
PDE4C-204ENST00000539010 A0A0G2JLL6 359 aaPredicted RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 GOLGA8HP0CJ92 632 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 IFNAR1P17181 557 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 ZNF157P51786 506 aaPredicted RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 RGMBQ6NW40 437 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 KCTD1Q719H9 257 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 FASTKD5Q7L8L6 764 aaKnown RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 PRRT2Q7Z6L0 340 aaPredicted RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 HHIPL1Q96JK4 782 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 VCAM1P19320 739 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 GTF2A2P52657 109 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 AKAP17AQ02040 695 aaKnown RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 ST3GAL1Q11201 340 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 FAM83BQ5T0W9 1011 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 STAG2Q8N3U4 1231 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 PROCA1Q8NCQ7 364 aaPredicted RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 CHURC1Q8WUH1 139 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
PDE4C-204ENST00000539010 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 KIF3AQ9Y496 699 aa16.46■□□□□ 0.23
PDE4C-204ENST00000539010 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
PDE4C-204ENST00000539010 PLA2G6O60733 806 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 PLEKHA8P1O95397 391 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 APLP1P51693 650 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 STAT2P52630 851 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 SSRP1Q08945 709 aaKnown RBP16.45■□□□□ 0.22
PDE4C-204ENST00000539010 NTRK3Q16288 839 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 KIAA1755Q5JYT7 1200 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 FAM160B2Q86V87 743 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 CCDC102AQ96A19 550 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 NUP88Q99567 741 aaPredicted RBP16.45■□□□□ 0.22
PDE4C-204ENST00000539010 SPZ1Q9BXG8 430 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
PDE4C-204ENST00000539010 TMEM232C9JQI7 657 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 CETPP11597 493 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 GJA5P36382 358 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 BTNL9Q6UXG8 535 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 GADL1Q6ZQY3 521 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 RASGRP2Q7LDG7 609 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 CCDC82Q8N4S0 544 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 SRBD1Q8N5C6 995 aaKnown RBP16.44■□□□□ 0.22
PDE4C-204ENST00000539010 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
PDE4C-204ENST00000539010 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
PDE4C-204ENST00000539010 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
PDE4C-204ENST00000539010 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 MYH6P13533 1939 aa16.44■□□□□ 0.22
PDE4C-204ENST00000539010 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 SLC4A3P48751 1232 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDE4C-204ENST00000539010 RASAL3Q86YV0 1011 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 SLC26A6Q9BXS9 759 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 TANGO6Q9C0B7 1094 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 CWC22Q9HCG8 908 aaKnown RBP16.43■□□□□ 0.22
PDE4C-204ENST00000539010 STK36Q9NRP7 1315 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L15C9J2P7 530 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L13C9JLJ4 530 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L11C9JVI0 530 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L18D6R9N7 530 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L22D6RA61 530 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L17D6RBQ6 530 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L19D6RCP7 530 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L20D6RJB6 530 aa16.43■□□□□ 0.22
PDE4C-204ENST00000539010 PRPF3O43395 683 aaKnown RBP16.43■□□□□ 0.22
PDE4C-204ENST00000539010 FMNL1O95466 1100 aaPredicted RBP16.43■□□□□ 0.22
PDE4C-204ENST00000539010 USP17L24Q0WX57 530 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms