RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TMOD4Q9NZQ9 345 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 ISY1Q9ULR0 285 aaKnown RBP27.42■■□□□ 1.98
TMEM260-202ENST00000538838 SNAPC2Q13487 334 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 RTN1Q16799 776 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 FAM83BQ5T0W9 1011 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 KCTD1Q719H9 257 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 FANCBQ8NB91 859 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 CTCFLQ8NI51 663 aaPredicted RBP27.41■■□□□ 1.98
TMEM260-202ENST00000538838 LPAR1Q92633 364 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 MAD2L2Q9UI95 211 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 PFKFB2O60825 505 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 PARP1P09874 1014 aaKnown RBP27.41■■□□□ 1.98
TMEM260-202ENST00000538838 ZNF543Q08ER8 600 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 ST3GAL1Q11201 340 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 SCRN1Q12765 414 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 GADL1Q6ZQY3 521 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 PAXIP1Q6ZW49 1069 aaPredicted RBP27.41■■□□□ 1.98
TMEM260-202ENST00000538838 STAG2Q8N3U4 1231 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 MAP3K14Q99558 947 aa27.41■■□□□ 1.98
TMEM260-202ENST00000538838 FAM155AB1AL88 458 aaPredicted RBP27.4■■□□□ 1.98
TMEM260-202ENST00000538838 K7ELQ4 463 aaPredicted RBP27.4■■□□□ 1.98
TMEM260-202ENST00000538838 CDC27P30260 824 aa27.4■■□□□ 1.98
TMEM260-202ENST00000538838 GTF3C6Q969F1 213 aa27.4■■□□□ 1.98
TMEM260-202ENST00000538838 GPCPD1Q9NPB8 672 aa27.4■■□□□ 1.98
TMEM260-202ENST00000538838 SH2B1Q9NRF2 756 aaPredicted RBP27.4■■□□□ 1.98
TMEM260-202ENST00000538838 FAM217BQ9NTX9 383 aaPredicted RBP27.4■■□□□ 1.98
TMEM260-202ENST00000538838 WDR46O15213 610 aaKnown RBP27.39■■□□□ 1.98
TMEM260-202ENST00000538838 BMP3P12645 472 aa27.39■■□□□ 1.98
TMEM260-202ENST00000538838 MOGSQ13724 837 aa27.39■■□□□ 1.98
TMEM260-202ENST00000538838 ASPRV1Q53RT3 343 aa27.39■■□□□ 1.98
TMEM260-202ENST00000538838 CYP4F22Q6NT55 531 aa27.39■■□□□ 1.98
TMEM260-202ENST00000538838 MS4A4AQ96JQ5 239 aa27.39■■□□□ 1.98
TMEM260-202ENST00000538838 RASSF10A6NK89 507 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 KIF5BP33176 963 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 ANP32AP39687 249 aaKnown RBP27.38■■□□□ 1.97
TMEM260-202ENST00000538838 GTF2A2P52657 109 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 HTRA3P83110 453 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 GRM1Q13255 1194 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 CCDC102AQ96A19 550 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 RLFQ13129 1914 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 PALM3A6NDB9 673 aaPredicted RBP27.38■■□□□ 1.97
TMEM260-202ENST00000538838 PLEKHA8P1O95397 391 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 ADD1P35611 737 aaKnown RBP27.38■■□□□ 1.97
TMEM260-202ENST00000538838 TREML2Q5T2D2 321 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 TTBK2Q6IQ55 1244 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 CCDC83Q8IWF9 413 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 PROCA1Q8NCQ7 364 aaPredicted RBP27.38■■□□□ 1.97
TMEM260-202ENST00000538838 CPVLQ9H3G5 476 aa27.38■■□□□ 1.97
TMEM260-202ENST00000538838 RPAP3Q9H6T3 665 aaPredicted RBP27.38■■□□□ 1.97
TMEM260-202ENST00000538838 MYH6P13533 1939 aa27.37■■□□□ 1.97
TMEM260-202ENST00000538838 DEFB115Q30KQ5 88 aa27.37■■□□□ 1.97
TMEM260-202ENST00000538838 GPATCH4Q5T3I0 446 aaKnown RBP27.37■■□□□ 1.97
TMEM260-202ENST00000538838 CMTR1Q8N1G2 835 aaKnown RBP27.37■■□□□ 1.97
TMEM260-202ENST00000538838 TANGO6Q9C0B7 1094 aa27.37■■□□□ 1.97
TMEM260-202ENST00000538838 RBM28Q9NW13 759 aaKnown RBP27.37■■□□□ 1.97
TMEM260-202ENST00000538838 CCL15-CCL14A0A0B4J2E2 113 aa27.36■■□□□ 1.97
TMEM260-202ENST00000538838 CETPP11597 493 aa27.36■■□□□ 1.97
TMEM260-202ENST00000538838 CCL15Q16663 113 aa27.36■■□□□ 1.97
TMEM260-202ENST00000538838 TMTC3Q6ZXV5 915 aa27.36■■□□□ 1.97
TMEM260-202ENST00000538838 BAZ2BQ9UIF8 2168 aaKnown RBP27.35■■□□□ 1.97
TMEM260-202ENST00000538838 TMEM232C9JQI7 657 aa27.35■■□□□ 1.97
TMEM260-202ENST00000538838 KLRF2D3W0D1 207 aa27.35■■□□□ 1.97
TMEM260-202ENST00000538838 DTNBO60941 627 aa27.35■■□□□ 1.97
TMEM260-202ENST00000538838 FASTKD5Q7L8L6 764 aaKnown RBP27.35■■□□□ 1.97
TMEM260-202ENST00000538838 BRI3BPQ8WY22 251 aa27.35■■□□□ 1.97
TMEM260-202ENST00000538838 SLC16A2P36021 539 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 PPP2R5BQ15173 497 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 NBPF11Q86T75 865 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 UBA5Q9GZZ9 404 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 CCDC196A0A1B0GTZ2 297 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 IKQ13123 557 aaPredicted RBP27.34■■□□□ 1.97
TMEM260-202ENST00000538838 SLC35G1Q2M3R5 365 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 GPAT2Q6NUI2 795 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 SRBD1Q8N5C6 995 aaKnown RBP27.34■■□□□ 1.97
TMEM260-202ENST00000538838 CAPNS2Q96L46 248 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 FBXO28Q9NVF7 368 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 AGTPBP1Q9UPW5 1226 aa27.34■■□□□ 1.97
TMEM260-202ENST00000538838 STAT2P52630 851 aa27.33■■□□□ 1.97
TMEM260-202ENST00000538838 C1QTNF8P60827 252 aa27.33■■□□□ 1.97
TMEM260-202ENST00000538838 CCDC82Q8N4S0 544 aa27.33■■□□□ 1.97
TMEM260-202ENST00000538838 COL11A1P12107 1806 aaPredicted RBP27.33■■□□□ 1.96
TMEM260-202ENST00000538838 CPLX1O14810 134 aa27.32■■□□□ 1.96
TMEM260-202ENST00000538838 PPFIA3O75145 1194 aa27.32■■□□□ 1.96
TMEM260-202ENST00000538838 GNAQP50148 359 aa27.32■■□□□ 1.96
TMEM260-202ENST00000538838 BECN1Q14457 450 aa27.32■■□□□ 1.96
TMEM260-202ENST00000538838 NTRK3Q16288 839 aa27.32■■□□□ 1.96
TMEM260-202ENST00000538838 SAMD1Q6SPF0 538 aaPredicted RBP27.32■■□□□ 1.96
TMEM260-202ENST00000538838 CNTNAP5Q8WYK1 1306 aa27.32■■□□□ 1.96
TMEM260-202ENST00000538838 MANSC4A6NHS7 340 aaPredicted RBP27.31■■□□□ 1.96
TMEM260-202ENST00000538838 CTDNEP1O95476 244 aa27.31■■□□□ 1.96
TMEM260-202ENST00000538838 ZIC5Q96T25 663 aa27.31■■□□□ 1.96
TMEM260-202ENST00000538838 FEM1BQ9UK73 627 aa27.31■■□□□ 1.96
TMEM260-202ENST00000538838 A0A0G2JMZ2 1700 aa27.31■■□□□ 1.96
TMEM260-202ENST00000538838 USP17L15C9J2P7 530 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 BTBD19C9JJ37 291 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 USP17L13C9JLJ4 530 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 USP17L11C9JVI0 530 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 USP17L18D6R9N7 530 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 USP17L22D6RA61 530 aa27.3■■□□□ 1.96
TMEM260-202ENST00000538838 USP17L17D6RBQ6 530 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms