RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ATG4CQ96DT6 458 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 MMP19Q99542 508 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 TINF2Q9BSI4 451 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 MSRAQ9UJ68 235 aa13.59□□□□□ -0.23
CLPB-208ENST00000538021 TCF20Q9UGU0 1960 aaKnown RBP13.59□□□□□ -0.23
CLPB-208ENST00000538021 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
CLPB-208ENST00000538021 ADAMTS4O75173 837 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
CLPB-208ENST00000538021 CSF2RAP15509 400 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 SLFN5Q08AF3 891 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 ZNF365Q70YC5 407 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 MICALL1Q8N3F8 863 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 MAGEB6Q8N7X4 407 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 TSEN34Q9BSV6 310 aaKnown RBP13.58□□□□□ -0.24
CLPB-208ENST00000538021 NKX2-4Q9H2Z4 354 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 TBX21Q9UL17 535 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 CHD7Q9P2D1 2997 aa13.58□□□□□ -0.24
CLPB-208ENST00000538021 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 ZNF865P0CJ78 1059 aaPredicted RBP13.57□□□□□ -0.24
CLPB-208ENST00000538021 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
CLPB-208ENST00000538021 RAB30Q15771 203 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 TNNI3KQ59H18 835 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 PSRC1Q6PGN9 363 aaPredicted RBP13.57□□□□□ -0.24
CLPB-208ENST00000538021 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 SPICE1Q8N0Z3 855 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 TMEM199Q8N511 208 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 GLT1D1Q96MS3 346 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 PPP1R12CQ9BZL4 782 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 SLC28A3Q9HAS3 691 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
CLPB-208ENST00000538021 ZNFX1Q9P2E3 1918 aaKnown RBP13.56□□□□□ -0.24
CLPB-208ENST00000538021 A0A0G2JMZ2 1700 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 IGSF3O75054 1194 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 SLC25A27O95847 323 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 GNAI2P04899 355 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 BMP1P13497 986 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 TFF2Q03403 129 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 KCTD2Q14681 263 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 TMEM132BQ14DG7 1078 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 SKIV2LQ15477 1246 aaKnown RBP13.56□□□□□ -0.24
CLPB-208ENST00000538021 KCNA10Q16322 511 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 KIAA1755Q5JYT7 1200 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 RASIP1Q5U651 963 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 CXXC1Q9P0U4 656 aaPredicted RBP13.56□□□□□ -0.24
CLPB-208ENST00000538021 MROH7Q68CQ1 1323 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 SYNRGQ9UMZ2 1314 aa13.56□□□□□ -0.24
CLPB-208ENST00000538021 ZNF792Q3KQV3 632 aa13.55□□□□□ -0.24
CLPB-208ENST00000538021 KLHDC9Q8NEP7 349 aa13.55□□□□□ -0.24
CLPB-208ENST00000538021 LRFN3Q9BTN0 628 aa13.55□□□□□ -0.24
CLPB-208ENST00000538021 GPR108Q9NPR9 543 aa13.55□□□□□ -0.24
CLPB-208ENST00000538021 ZHX1Q9UKY1 873 aaPredicted RBP13.55□□□□□ -0.24
CLPB-208ENST00000538021 DIS3Q9Y2L1 958 aaKnown RBP13.55□□□□□ -0.24
CLPB-208ENST00000538021 ROBO3Q96MS0 1386 aa13.55□□□□□ -0.24
CLPB-208ENST00000538021 MYADML2A6NDP7 307 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 KCNQ1P51787 676 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 EVX2Q03828 476 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 AAK1Q2M2I8 961 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 TMEM179Q6ZVK1 233 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 ZNF512BQ96KM6 892 aaPredicted RBP13.54□□□□□ -0.24
CLPB-208ENST00000538021 MTIF3Q9H2K0 278 aaKnown RBP13.54□□□□□ -0.24
CLPB-208ENST00000538021 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 ARHGEF10LQ9HCE6 1279 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 MCM9Q9NXL9 1143 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 FAM184BQ9ULE4 1060 aa13.54□□□□□ -0.24
CLPB-208ENST00000538021 YBX2Q9Y2T7 364 aaKnown RBP13.54□□□□□ -0.24
CLPB-208ENST00000538021 ARVCFO00192 962 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 TLR3O15455 904 aaKnown RBP13.53□□□□□ -0.24
CLPB-208ENST00000538021 FGBP02675 491 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 ASGR1P07306 291 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 C6orf222P0C671 652 aaPredicted RBP13.53□□□□□ -0.24
CLPB-208ENST00000538021 CYP2C18P33260 490 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 STAT3P40763 770 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 CDK7P50613 346 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
CLPB-208ENST00000538021 GABPAQ06546 454 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 RIOX2Q8IUF8 465 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 CLEC10AQ8IUN9 316 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 HERVK_113Q902F9 699 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
CLPB-208ENST00000538021 VCPKMTQ9H867 229 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 IL23AQ9NPF7 189 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 ELP1O95163 1332 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
CLPB-208ENST00000538021 MAGEB6P1A0A0J9YX57 407 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 A0A0U1RQG5 324 aaPredicted RBP13.52□□□□□ -0.25
CLPB-208ENST00000538021 WDR46O15213 610 aaKnown RBP13.52□□□□□ -0.25
CLPB-208ENST00000538021 RABGGTBP53611 331 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 ICA1Q05084 483 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 TMEM31Q5JXX7 168 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 PPP2R2DQ66LE6 453 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 CCSAPQ6IQ19 270 aaPredicted RBP13.52□□□□□ -0.25
CLPB-208ENST00000538021 OTOP2Q7RTS6 562 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 PCSK9Q8NBP7 692 aaKnown RBP13.52□□□□□ -0.25
CLPB-208ENST00000538021 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 SH2D4AQ9H788 454 aa13.52□□□□□ -0.25
CLPB-208ENST00000538021 SPC25Q9HBM1 224 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms