RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 ERCC3P19447 782 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 LBX2Q6XYB7 198 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 KLHDC4Q8TBB5 520 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 NEK9Q8TD19 979 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 EDAQ92838 391 aa11.93□□□□□ -0.5
CPSF7-217ENST00000537162 ROBO3Q96MS0 1386 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 KIF16BQ96L93 1317 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 SALL1Q9NSC2 1324 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 NCOR2Q9Y618 2525 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 STRNO43815 780 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 ASGR1P07306 291 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 ASNSP08243 561 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 FLIIQ13045 1269 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 ADHFE1Q8IWW8 467 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 ZNF384Q8TF68 577 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 VTI1AQ96AJ9 217 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 FSD1Q9BTV5 496 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 NOC4LQ9BVI4 516 aaKnown RBP11.92□□□□□ -0.5
CPSF7-217ENST00000537162 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 LMCD1Q9NZU5 365 aa11.92□□□□□ -0.5
CPSF7-217ENST00000537162 CACNA1HO95180 2353 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 RIF1Q5UIP0 2472 aaKnown RBP11.91□□□□□ -0.5
CPSF7-217ENST00000537162 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-217ENST00000537162 F6X3S4 739 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 TLR3O15455 904 aaKnown RBP11.91□□□□□ -0.5
CPSF7-217ENST00000537162 IFIT1P09914 478 aaKnown RBP11.91□□□□□ -0.5
CPSF7-217ENST00000537162 AKR1A1P14550 325 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 FKBP5Q13451 457 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-217ENST00000537162 BEND3Q5T5X7 828 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 RNF135Q8IUD6 432 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 SUGP1Q8IWZ8 645 aaKnown RBP11.91□□□□□ -0.5
CPSF7-217ENST00000537162 RMDN1Q96DB5 314 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 SUCLG2Q96I99 432 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 C12orf42Q96LP6 360 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 STK31Q9BXU1 1019 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 ZBTB21Q9ULJ3 1066 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 FAM186AA6NE01 2351 aa11.91□□□□□ -0.5
CPSF7-217ENST00000537162 CHD8Q9HCK8 2581 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 RBAK-RBAKDNI3L0D1 243 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 ADCY6O43306 1168 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 PGK2P07205 417 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 VCAM1P19320 739 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 PUM3Q15397 648 aaKnown RBP11.9□□□□□ -0.5
CPSF7-217ENST00000537162 HERC6Q8IVU3 1022 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 FBXL6Q8N531 539 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-217ENST00000537162 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 SUGCTQ9HAC7 445 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 PRKAG3Q9UGI9 489 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 NRBP1Q9UHY1 535 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 HERC5Q9UII4 1024 aaKnown RBP11.9□□□□□ -0.5
CPSF7-217ENST00000537162 MTUS1Q9ULD2 1270 aa11.9□□□□□ -0.5
CPSF7-217ENST00000537162 SIP14410 1827 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 GRM8O00222 908 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 GNAI1P63096 354 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 PUS10Q3MIT2 529 aaKnown RBP11.89□□□□□ -0.51
CPSF7-217ENST00000537162 TMCO2Q7Z6W1 182 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-217ENST00000537162 DEFB128Q7Z7B8 93 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 DZIP1Q86YF9 867 aaKnown RBP11.89□□□□□ -0.51
CPSF7-217ENST00000537162 ADSSL1Q8N142 457 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 TINF2Q9BSI4 451 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 UPF3BQ9BZI7 483 aaKnown RBP11.89□□□□□ -0.51
CPSF7-217ENST00000537162 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 TRPV6Q9H1D0 765 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 ZNF292O60281 2723 aa11.89□□□□□ -0.51
CPSF7-217ENST00000537162 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-217ENST00000537162 DGLUCYQ7Z3D6 616 aa11.88□□□□□ -0.51
CPSF7-217ENST00000537162 RPUSD2Q8IZ73 545 aaKnown RBP11.88□□□□□ -0.51
CPSF7-217ENST00000537162 RPAP3Q9H6T3 665 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-217ENST00000537162 SLC5A4Q9NY91 659 aa11.88□□□□□ -0.51
CPSF7-217ENST00000537162 ATRXP46100 2492 aa11.88□□□□□ -0.51
CPSF7-217ENST00000537162 GRIN2DO15399 1336 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 GVINP1Q7Z2Y8 2422 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 CTAGE5O15320 804 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-217ENST00000537162 AVPR2P30518 371 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 PHKA1P46020 1223 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 NCAPG2Q86XI2 1143 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 SLC43A3Q8NBI5 491 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 SHCBP1Q8NEM2 672 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
CPSF7-217ENST00000537162 SLC9A7Q96T83 725 aa11.87□□□□□ -0.51
CPSF7-217ENST00000537162 B4GALT4O60513 344 aa11.86□□□□□ -0.51
CPSF7-217ENST00000537162 GH2P01242 217 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms