RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 CTR9Q6PD62 1173 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 C10orf67Q8IYJ2 551 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 ESR2Q92731 530 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 TMOD3Q9NYL9 352 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 DUOX1Q9NRD9 1551 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 TNKSO95271 1327 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 LRRIQ3A6PVS8 624 aaPredicted RBP13.64□□□□□ -0.23
PTCD2-211ENST00000536805 TRIM66O15016 1216 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 NDUFA10O95299 355 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 GPTP24298 496 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 KRT9P35527 623 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 TRAPPC10P48553 1259 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 HLFQ16534 295 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 EARS2Q5JPH6 523 aaKnown RBP13.64□□□□□ -0.23
PTCD2-211ENST00000536805 ZNF658Q5TYW1 1059 aaPredicted RBP13.64□□□□□ -0.23
PTCD2-211ENST00000536805 GOLGA6L1Q8N7Z2 621 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 EHBP1Q8NDI1 1231 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 SLF1Q9BQI6 1058 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 TAB2Q9NYJ8 693 aa13.64□□□□□ -0.23
PTCD2-211ENST00000536805 EPN1Q9Y6I3 576 aaPredicted RBP13.64□□□□□ -0.23
PTCD2-211ENST00000536805 A0A1W2PQC6 194 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 ABL1P00519 1130 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 TFRCP02786 760 aaKnown RBP13.63□□□□□ -0.23
PTCD2-211ENST00000536805 CALM1P0DP23 149 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 CALM2P0DP24 149 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 CALM3P0DP25 149 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 CKAP4Q07065 602 aaKnown RBP13.63□□□□□ -0.23
PTCD2-211ENST00000536805 WWC2Q6AWC2 1192 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 NELFBQ8WX92 580 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 DNAJC7Q99615 494 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 CARD10Q9BWT7 1032 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 VPS16Q9H269 839 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 RSPH14Q9UHP6 348 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 REXO2Q9Y3B8 237 aaKnown RBP13.63□□□□□ -0.23
PTCD2-211ENST00000536805 NUP98P52948 1817 aa13.63□□□□□ -0.23
PTCD2-211ENST00000536805 H7C1D1 291 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
PTCD2-211ENST00000536805 PAPD7Q5XG87 772 aaKnown RBP13.62□□□□□ -0.23
PTCD2-211ENST00000536805 NCAPH2Q6IBW4 605 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 OR8K1Q8NGG5 319 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 IPO4Q8TEX9 1081 aaKnown RBP13.62□□□□□ -0.23
PTCD2-211ENST00000536805 FAM204AQ9H8W3 233 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
PTCD2-211ENST00000536805 RREB1Q92766 1687 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 RNF40O75150 1001 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 PRPF6O94906 941 aaKnown RBP13.62□□□□□ -0.23
PTCD2-211ENST00000536805 CDC25AP30304 524 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 MAGEA9P43362 315 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 TNNT3P45378 269 aaPredicted RBP13.62□□□□□ -0.23
PTCD2-211ENST00000536805 ZNF174Q15697 407 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 NPY5RQ15761 445 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 LRRC31Q6UY01 552 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 CATIPQ7Z7H3 387 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 AFAP1L1Q8TED9 768 aa13.62□□□□□ -0.23
PTCD2-211ENST00000536805 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
PTCD2-211ENST00000536805 WNT7AO00755 349 aa13.61□□□□□ -0.23
PTCD2-211ENST00000536805 DDAH1O94760 285 aa13.61□□□□□ -0.23
PTCD2-211ENST00000536805 PCP11498 1178 aaKnown RBP13.61□□□□□ -0.23
PTCD2-211ENST00000536805 UBXN1Q04323 297 aa13.61□□□□□ -0.23
PTCD2-211ENST00000536805 PTGDRQ13258 359 aa13.61□□□□□ -0.23
PTCD2-211ENST00000536805 SEMA3FQ13275 785 aa13.61□□□□□ -0.23
PTCD2-211ENST00000536805 ENAHQ8N8S7 591 aaPredicted RBP13.61□□□□□ -0.23
PTCD2-211ENST00000536805 ZSCAN10Q96SZ4 725 aaPredicted RBP13.61□□□□□ -0.23
PTCD2-211ENST00000536805 HPCAL4Q9UM19 191 aa13.61□□□□□ -0.23
PTCD2-211ENST00000536805 SAR1BQ9Y6B6 198 aa13.61□□□□□ -0.23
PTCD2-211ENST00000536805 ANO9A1A5B4 782 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 PPFIA4O75335 1185 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 SYF2O95926 243 aaKnown RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 RPN1P04843 607 aaKnown RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 EEF1GP26641 437 aaKnown RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 KRT83P78385 493 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 TMTC3Q6ZXV5 915 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 MB21D1Q8N884 522 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 CHP1Q99653 195 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 MTRQ99707 1265 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 BLZF1Q9H2G9 400 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 PRDM11Q9NQV5 511 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 CAPN11Q9UMQ6 739 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 GUCA1BQ9UMX6 200 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 PDS5AQ29RF7 1337 aaKnown RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 ZC3H4Q9UPT8 1303 aaKnown RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 TTC26A0AVF1 554 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 PRDM1O75626 825 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 PARP1P09874 1014 aaKnown RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 HERVK_113P62684 666 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 MEA1Q16626 185 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 HELBQ8NG08 1087 aaPredicted RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 COG1Q8WTW3 980 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 RUBCNQ92622 972 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 THAP9Q9H5L6 903 aa13.6□□□□□ -0.23
PTCD2-211ENST00000536805 LUC7L2Q9Y383 392 aaKnown RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 V9GY48 417 aaPredicted RBP13.6□□□□□ -0.23
PTCD2-211ENST00000536805 SOS2Q07890 1332 aaPredicted RBP13.59□□□□□ -0.23
PTCD2-211ENST00000536805 CNTNAP5Q8WYK1 1306 aa13.59□□□□□ -0.23
PTCD2-211ENST00000536805 PLEKHA8P1O95397 391 aa13.59□□□□□ -0.23
PTCD2-211ENST00000536805 LONP1P36776 959 aaKnown RBP13.59□□□□□ -0.23
PTCD2-211ENST00000536805 NOP2P46087 812 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms