RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	SFRP5	Q5T4F7	317 aa		7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	ZNF227	Q86WZ6	799 aa		7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	BVES	Q8NE79	360 aa		7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	VWCE	Q96DN2	955 aa		7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	FEZ1	Q99689	392 aa		7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	FAM83C	Q9BQN1	747 aa		7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	STOML1	Q9UBI4	398 aa		7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	AKT3	Q9Y243	479 aa		7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.75	□□□□□ -1.17
PRKDC-208	ENST00000536710	HMX2	A2RU54	273 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	C1QTNF9B	B2RNN3	333 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	PPP1R12A	O14974	1030 aa	Predicted RBP	7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	SHOX	O15266	292 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	L1CAM	P32004	1257 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	GYS2	P54840	703 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	LONRF2	Q1L5Z9	754 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	TKFC	Q3LXA3	575 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	FILIP1	Q7Z7B0	1213 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	CD163	Q86VB7	1156 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	FBXL6	Q8N531	539 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	TP53INP1	Q96A56	240 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	AARSD1	Q9BTE6	412 aa	Known RBP	7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	DSCC1	Q9BVC3	393 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	PRDM14	Q9GZV8	571 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	NOL6	Q9H6R4	1146 aa	Known RBP	7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	ARHGEF4	Q9NR80	690 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	GFOD1	Q9NXC2	390 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	KCNH3	Q9ULD8	1083 aa		7.74	□□□□□ -1.17
PRKDC-208	ENST00000536710	RBAK-RBAKDN	I3L0D1	243 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	ZNF445	P59923	1031 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	SNW1	Q13573	536 aa	Known RBP	7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	C21orf62-AS1	Q17RA5	79 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	FOXB2	Q5VYV0	432 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	POMZP3	Q6PJE2	187 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	C7orf69	Q9H7B7	122 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	GTF2IRD1	Q9UHL9	959 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	RAX	Q9Y2V3	346 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	CD2AP	Q9Y5K6	639 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	CNTNAP4	Q9C0A0	1308 aa		7.73	□□□□□ -1.17
PRKDC-208	ENST00000536710	MEIS1	O00470	390 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	KCNH1	O95259	989 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	ADM	P35318	185 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	CYP27C1	Q4G0S4	372 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	FAM209A	Q5JX71	171 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	ANKRD13A	Q8IZ07	590 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	SYNPO	Q8N3V7	929 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	FIBCD1	Q8N539	461 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	DCAF5	Q96JK2	942 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	COX4I2	Q96KJ9	171 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	ZDHHC15	Q96MV8	337 aa		7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	CGGBP1	Q9UFW8	167 aa	Predicted RBP	7.72	□□□□□ -1.17
PRKDC-208	ENST00000536710	TRBV23-1	A0A0A0MS06	115 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	PRODH	O43272	600 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	TBX1	O43435	398 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	DNAJC6	O75061	913 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	IBSP	P21815	317 aa	Predicted RBP	7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	GATA4	P43694	442 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	CLEC16A	Q2KHT3	1053 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	OGFOD3	Q6PK18	319 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	NSMF	Q6X4W1	530 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	ARHGAP27	Q6ZUM4	889 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	TMC3	Q7Z5M5	1100 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	ZAR1	Q86SH2	424 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	DTWD2	Q8NBA8	298 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	BTN2A2	Q8WVV5	523 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	RCC1L	Q96I51	464 aa	Known RBP	7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	EXOC2	Q96KP1	924 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	MFSD14A	Q96MC6	490 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	DHRS4	Q9BTZ2	278 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	SPC25	Q9HBM1	224 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	IFT57	Q9NWB7	429 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	EMC9	Q9Y3B6	208 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	PRKAB1	Q9Y478	270 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	FHOD1	Q9Y613	1164 aa		7.71	□□□□□ -1.18
PRKDC-208	ENST00000536710	CCDC163	A0A0D9SF12	145 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	GNAT3	A8MTJ3	354 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	GRIA2	P42262	883 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	KIR3DL1	P43629	444 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	NMI	Q13287	307 aa	Predicted RBP	7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	PTPRO	Q16827	1216 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	TRIM59	Q8IWR1	403 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	SCUBE1	Q8IWY4	988 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	ARHGEF39	Q8N4T4	335 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	SYTL5	Q8TDW5	730 aa	Predicted RBP	7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	IER2	Q9BTL4	223 aa		7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	DIS3	Q9Y2L1	958 aa	Known RBP	7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	SF3B6	Q9Y3B4	125 aa	Known RBP	7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710	MRPS23	Q9Y3D9	190 aa	Known RBP	7.7	□□□□□ -1.18
PRKDC-208	ENST00000536710		A0A087WZG4	1122 aa		7.69	□□□□□ -1.18
PRKDC-208	ENST00000536710	FAM170B	A6NMN3	283 aa		7.69	□□□□□ -1.18
PRKDC-208	ENST00000536710	PRR33	A8MZF0	331 aa		7.69	□□□□□ -1.18
PRKDC-208	ENST00000536710	FAM155A	B1AL88	458 aa	Predicted RBP	7.69	□□□□□ -1.18
PRKDC-208	ENST00000536710	PABPC1	P11940	636 aa	Known RBP	7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms