RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 UBE2SQ16763 222 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 TSGA10IPQ3SY00 556 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 ANO1Q5XXA6 986 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 GPIHBP1Q8IV16 184 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 FHDC1Q9C0D6 1143 aaPredicted RBP9.36□□□□□ -0.91
ABCA4-207ENST00000536513 ZSCAN16Q9H4T2 348 aaPredicted RBP9.36□□□□□ -0.91
ABCA4-207ENST00000536513 PCDHA7Q9UN72 937 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 CENPFP49454 3210 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 TMEM232C9JQI7 657 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 ANO6Q4KMQ2 910 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 CCDC183Q5T5S1 534 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 UTP14CQ5TAP6 766 aaKnown RBP9.36□□□□□ -0.91
ABCA4-207ENST00000536513 MICALL2Q8IY33 904 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
ABCA4-207ENST00000536513 IL17RBQ9NRM6 502 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 PLEKHG2Q9H7P9 1386 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 FAM170AA1A519 330 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 ZNF76P36508 570 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 RESTQ13127 1097 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 CNNM3Q8NE01 707 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 KCNG1Q9UIX4 513 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 RTL9Q8NET4 1388 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 WDHD1O75717 1129 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 ECE1P42892 770 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 STX17P56962 302 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 IRX3P78415 501 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 KIF23Q02241 960 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 GRIN1Q05586 938 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 SLC30A10Q6XR72 485 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 KRT222Q8N1A0 295 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 TANGO6Q9C0B7 1094 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 GPR75-ASB3A0A0A6YYF3 556 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 POLR2DO15514 142 aaKnown RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 EPB41L2O43491 1005 aaKnown RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 CFBP00751 764 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 EEF2P13639 858 aaKnown RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 HOXA13P31271 388 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 KRT2P35908 639 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 SYKP43405 635 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 NDUFA8P51970 172 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 APOBEC3HQ6NTF7 200 aaKnown RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 RTKN2Q8IZC4 609 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 RRP36Q96EU6 259 aaKnown RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 TMX1Q9H3N1 280 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 BMP2KQ9NSY1 1161 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 ARGLU1Q9NWB6 273 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 TMEM260Q9NX78 707 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 SMCO2A6NFE2 343 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 DDNO94850 711 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 IL1R1P14778 569 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 HMGB2P26583 209 aaKnown RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 TXKP42681 527 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 GMPSP49915 693 aaPredicted RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 SUPT20HQ8NEM7 779 aa9.35□□□□□ -0.91
ABCA4-207ENST00000536513 LLPHQ9BRT6 129 aaKnown RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 CNOT7Q9UIV1 285 aaKnown RBP9.35□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 CCNT1O60563 726 aaKnown RBP9.34□□□□□ -0.91
ABCA4-207ENST00000536513 SMC2O95347 1197 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 LIFRP42702 1097 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 RHBDL3P58872 404 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 RASA3Q14644 834 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 STRIP1Q5VSL9 837 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 SLFN13Q68D06 897 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP49Q70CQ1 688 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 CCDC186Q7Z3E2 898 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 NOSTRINQ8IVI9 506 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 MTFR1LQ9H019 292 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
ABCA4-207ENST00000536513 ZBTB21Q9ULJ3 1066 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L15C9J2P7 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L13C9JLJ4 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L11C9JVI0 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L18D6R9N7 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L22D6RA61 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L17D6RBQ6 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L19D6RCP7 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L20D6RJB6 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 SCG2P13521 617 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L24Q0WX57 530 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 ALX1Q15699 326 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 DACT2Q5SW24 774 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 USP17L6PQ6QN14 398 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 MRPS27Q92552 414 aaKnown RBP9.34□□□□□ -0.91
ABCA4-207ENST00000536513 KCNB2Q92953 911 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 BLZF1Q9H2G9 400 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 FAM217BQ9NTX9 383 aaPredicted RBP9.34□□□□□ -0.91
ABCA4-207ENST00000536513 OGFRQ9NZT2 677 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 COL22A1Q8NFW1 1626 aaPredicted RBP9.34□□□□□ -0.91
ABCA4-207ENST00000536513 H7C1D1 291 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 CHMP2AO43633 222 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 CALM1P0DP23 149 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 CALM2P0DP24 149 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 CALM3P0DP25 149 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 ZSCAN20P17040 1043 aaPredicted RBP9.34□□□□□ -0.91
ABCA4-207ENST00000536513 ZNF165P49910 485 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms