RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 RAI14Q9P0K7 980 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 CPA4Q9UI42 421 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 DDX41Q9UJV9 622 aaKnown RBP13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 PTCH2Q9Y6C5 1203 aa13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 KIAA0100Q14667 2235 aaKnown RBP13.34□□□□□ -0.27
CHRNB1-202ENST00000536404 CENPFP49454 3210 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 ZSWIM8A7E2V4 1837 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 BECN2A8MW95 431 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 U2AF2P26368 475 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 MAP3K10Q02779 954 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 CEP135Q66GS9 1140 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 GPAT2Q6NUI2 795 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 C17orf99Q6UX52 265 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 ARMC5Q96C12 935 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 EAF2Q96CJ1 260 aaPredicted RBP13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 DBNDD2Q9BQY9 259 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 BRMS1Q9HCU9 246 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 IMPACTQ9P2X3 320 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 FPGT-TNNI3KV9GXZ4 949 aa13.33□□□□□ -0.28
CHRNB1-202ENST00000536404 A0A0D9SFI3 127 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 KINO60870 393 aaKnown RBP13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 LDHCP07864 332 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 UQCRFS1P1P0C7P4 283 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 PTPRAP18433 802 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 TPM4P67936 248 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 GSTO1P78417 241 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 DHX37Q8IY37 1157 aaKnown RBP13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 CEP57L1Q8IYX8 460 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 GPR108Q9NPR9 543 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 RCOR1Q9UKL0 485 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 ZHX2Q9Y6X8 837 aa13.32□□□□□ -0.28
CHRNB1-202ENST00000536404 CXCL11O14625 94 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 CCP110O43303 1012 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 NR1I2O75469 434 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 CTGFP29279 349 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 LACTBP83111 547 aaPredicted RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 NCBP1Q09161 790 aaKnown RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 PTPN14Q15678 1187 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 CCDC84Q86UT8 332 aaPredicted RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 SMARCC2Q8TAQ2 1214 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 BRF1Q92994 677 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 C16orf45Q96MC5 204 aaPredicted RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 BOLA2Q9H3K6 86 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 PICK1Q9NRD5 415 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 LRP2BPQ9P2M1 347 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 TFIP11Q9UBB9 837 aaKnown RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 DOCK2Q92608 1830 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 ADGRA2Q96PE1 1338 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 FAM196BA6NMK8 535 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 PFKFB2O60825 505 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 EN2P19622 333 aaPredicted RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 KIF22Q14807 665 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 ZRSR1Q15695 479 aaKnown RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 LRRC8AQ8IWT6 810 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 ZNF397Q8NF99 534 aaPredicted RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 TSC1Q92574 1164 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 CCDC8Q9H0W5 538 aaPredicted RBP13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 CTNNA3Q9UI47 895 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 AFG3L2Q9Y4W6 797 aa13.31□□□□□ -0.28
CHRNB1-202ENST00000536404 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 MYCP01106 439 aaPredicted RBP13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 CYP2C8P10632 490 aa13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 KCNJ6P48051 423 aa13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 IQCB1Q15051 598 aa13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 MCMDC2Q4G0Z9 681 aa13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 SH3RF3Q8TEJ3 882 aaPredicted RBP13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 ZNF333Q96JL9 665 aa13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 PGBD1Q96JS3 809 aa13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 MYCBPQ99417 103 aaPredicted RBP13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 TLR7Q9NYK1 1049 aaKnown RBP13.3□□□□□ -0.28
CHRNB1-202ENST00000536404 A0A0G2JLL6 359 aaPredicted RBP13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 TBC1D12O60347 775 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 CTNND1O60716 968 aaKnown RBP13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 PSMC4P43686 418 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 SLC9C1Q4G0N8 1177 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 Q6ZUG5 572 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 PRRT2Q7Z6L0 340 aaPredicted RBP13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 CCAR1Q8IX12 1150 aaKnown RBP13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 TEX11Q8IYF3 940 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 CCDC150Q8NCX0 1101 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 SH3TC2Q8TF17 1288 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 CACTINQ8WUQ7 758 aaKnown RBP13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 TRIM47Q96LD4 638 aa13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 OSBPL5Q9H0X9 879 aaPredicted RBP13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHRNB1-202ENST00000536404 ZAP70P43403 619 aa13.28□□□□□ -0.28
CHRNB1-202ENST00000536404 STK3Q13188 491 aa13.28□□□□□ -0.28
CHRNB1-202ENST00000536404 RRP1BQ14684 758 aaKnown RBP13.28□□□□□ -0.28
CHRNB1-202ENST00000536404 LRRFIP1Q32MZ4 808 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms