RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PRAMEF19Q5SWL8 479 aa15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 NRBP1Q9UHY1 535 aa15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 SLC4A4Q9Y6R1 1079 aa15.59■□□□□ 0.09
TNFRSF1A-207ENST00000535958 USP17L12C9JPN9 530 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 USP17L21D6R901 530 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 POTEB2H3BUK9 544 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 KIAA1755Q5JYT7 1200 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 C16orf86Q6ZW13 317 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 BADQ92934 168 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 GUCD1Q96NT3 240 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 KANSL2Q9H9L4 492 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 PDLIM7Q9NR12 457 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 CNPY2Q9Y2B0 182 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.08
TNFRSF1A-207ENST00000535958 IGHA2P01877 340 aa15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 EEF2P13639 858 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ATP5JP18859 108 aa15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 TMEM132BQ14DG7 1078 aa15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SNX17Q15036 470 aa15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 C12orf60Q5U649 245 aa15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 RIOX2Q8IUF8 465 aa15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 TINF2Q9BSI4 451 aa15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ARPP21Q9UBL0 812 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-207ENST00000535958 MYH7P12883 1935 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 CUL9Q8IWT3 2517 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 CYP2D7A0A087X1C5 515 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 PGK2P07205 417 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 CLTBP09497 229 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 AKR1A1P14550 325 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 STAT3P40763 770 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 UBE3CQ15386 1083 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SHHQ15465 462 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 FAM83BQ5T0W9 1011 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 C1orf53Q5VUE5 145 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 HAUS7Q99871 368 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 PPP1R9AQ9ULJ8 1098 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 COG6Q9Y2V7 657 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 TACC3Q9Y6A5 838 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 COL11A1P12107 1806 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 PARP14Q460N5 1801 aa15.56■□□□□ 0.08
TNFRSF1A-207ENST00000535958 DNAH12Q6ZR08 3092 aa15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 VWA5AO00534 786 aa15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 PQBP1O60828 265 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 RAG1P15918 1043 aa15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 RNPC3Q96LT9 517 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 FBXO28Q9NVF7 368 aa15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 PHF24Q9UPV7 400 aa15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 DIS3Q9Y2L1 958 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-207ENST00000535958 PLXNA1Q9UIW2 1896 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ROBO3Q96MS0 1386 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 PGK1P00558 417 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SLC4A3P48751 1232 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SMAD3P84022 425 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 TLE2Q04725 743 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SLFNL1Q499Z3 407 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 C9orf50Q5SZB4 431 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SIAH1Q8IUQ4 282 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 DDX11Q96FC9 970 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 GPATCH3Q96I76 525 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SLF1Q9BQI6 1058 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 TEX13BQ9BXU2 312 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 LRRCC1Q9C099 1032 aa15.54■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ZNFX1Q9P2E3 1918 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 A0A1W2PQ45 241 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 A0A1W2PQY0 241 aa15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ZNF792Q3KQV3 632 aa15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SNRNP48Q6IEG0 339 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 CTR9Q6PD62 1173 aa15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SH3RF1Q7Z6J0 888 aa15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 MAFAQ8NHW3 353 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 NUP133Q8WUM0 1156 aa15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 CDX2Q99626 313 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 COL25A1Q9BXS0 654 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ZNF287Q9HBT7 754 aa15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 STARD7Q9NQZ5 370 aa15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 TMEM39AQ9NV64 488 aa15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ZHX1Q9UKY1 873 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-207ENST00000535958 A0A0C4DFX4 3053 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 TRIM43BA6NCK2 446 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 DCDC2CA8MYV0 355 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ZBED4O75132 1171 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 FOSL2P15408 326 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 FPGSQ05932 587 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 STK11IPQ8N1F8 1099 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 MSL3Q8N5Y2 521 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 TRIM43Q96BQ3 446 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SEMA6BQ9H3T3 888 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SPC25Q9HBM1 224 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ZBTB40Q9NUA8 1239 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ZNF214Q9UL59 606 aaPredicted RBP15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 FAM184BQ9ULE4 1060 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ISY1Q9ULR0 285 aaKnown RBP15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 ADAMTS5Q9UNA0 930 aa15.52■□□□□ 0.08
TNFRSF1A-207ENST00000535958 SYNGAP1Q96PV0 1343 aa15.51■□□□□ 0.07
TNFRSF1A-207ENST00000535958 MINDY4BA8MYZ0 360 aa15.51■□□□□ 0.07
TNFRSF1A-207ENST00000535958 TDO2P48775 406 aa15.51■□□□□ 0.07
TNFRSF1A-207ENST00000535958 SIRT2Q8IXJ6 389 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms