RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SMIM24O75264 130 aa13.96□□□□□ -0.18
SPG11-203ENST00000535302 ZNF75DP51815 510 aa13.96□□□□□ -0.18
SPG11-203ENST00000535302 CTAGE3PQ8IX95 158 aa13.96□□□□□ -0.18
SPG11-203ENST00000535302 EXOC7Q9UPT5 735 aa13.96□□□□□ -0.18
SPG11-203ENST00000535302 RPS6KA2Q15349 733 aa13.96□□□□□ -0.18
SPG11-203ENST00000535302 RRAGAQ7L523 313 aa13.96□□□□□ -0.18
SPG11-203ENST00000535302 CCDC105Q8IYK2 499 aa13.96□□□□□ -0.18
SPG11-203ENST00000535302 EEF2KMTQ96G04 330 aa13.96□□□□□ -0.18
SPG11-203ENST00000535302 CCDC62Q6P9F0 684 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 VSIG1Q86XK7 387 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 LSM14BQ9BX40 385 aaKnown RBP13.95□□□□□ -0.18
SPG11-203ENST00000535302 CACYBPQ9HB71 228 aaKnown RBP13.95□□□□□ -0.18
SPG11-203ENST00000535302 NDUFAB1O14561 156 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 STK10O94804 968 aaKnown RBP13.95□□□□□ -0.18
SPG11-203ENST00000535302 ZNF827Q17R98 1081 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 SMYD2Q9NRG4 433 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 IGBP1P78318 339 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 HP1BP3Q5SSJ5 553 aaPredicted RBP13.95□□□□□ -0.18
SPG11-203ENST00000535302 ARHGEF16Q5VV41 709 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 APOL6Q9BWW8 343 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 PIK3C2GO75747 1445 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 BICRAQ9NZM4 1560 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 VCX3BQ9H321 246 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 KRT25Q7Z3Z0 450 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 NOX5Q96PH1 765 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 MMS19Q96T76 1030 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 IRAK4Q9NWZ3 460 aa13.95□□□□□ -0.18
SPG11-203ENST00000535302 ARHGAP42A6NI28 874 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 LLGL1Q15334 1064 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 KLHL30Q0D2K2 578 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 CLIC6Q96NY7 704 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 MAST3O60307 1309 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 ERCC6LQ2NKX8 1250 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 MIER3Q7Z3K6 550 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 UBL4BQ8N7F7 174 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 FIS1Q9Y3D6 152 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 COL17A1Q9UMD9 1497 aaPredicted RBP13.94□□□□□ -0.18
SPG11-203ENST00000535302 Q3C1V9 767 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 GPBP1Q86WP2 473 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 CACNA2D3Q8IZS8 1091 aa13.94□□□□□ -0.18
SPG11-203ENST00000535302 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
SPG11-203ENST00000535302 NSMCE1Q8WV22 266 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 BUB1O43683 1085 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 ZNF853P0CG23 659 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 USH1CQ9Y6N9 552 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 ADCY1Q08828 1119 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 ARHGAP27Q6ZUM4 889 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 GAS7O60861 476 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 CLRN2A0PK11 232 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 IFNB1P01574 187 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 ZNF654Q8IZM8 581 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 REXO1Q8N1G1 1221 aaKnown RBP13.93□□□□□ -0.18
SPG11-203ENST00000535302 EDC4Q6P2E9 1401 aaKnown RBP13.93□□□□□ -0.18
SPG11-203ENST00000535302 SLC12A2P55011 1212 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 KRT81Q14533 505 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 TTC30AQ86WT1 665 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 ZSCAN10Q96SZ4 725 aaPredicted RBP13.93□□□□□ -0.18
SPG11-203ENST00000535302 DESI2Q9BSY9 194 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 MLXIPQ9HAP2 919 aa13.93□□□□□ -0.18
SPG11-203ENST00000535302 SLC9C1Q4G0N8 1177 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 BRDTQ58F21 947 aaPredicted RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 LLPHQ9BRT6 129 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 PUS3Q9BZE2 481 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 VWA3BQ502W6 1294 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 SFMBT2Q5VUG0 894 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 SFMBT1Q9UHJ3 866 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 PALD1Q9ULE6 856 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 OATP04181 439 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 ADD1P35611 737 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 BTDP43251 543 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 MAGEA1P43355 309 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 RPS8P62241 208 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 GPR162Q16538 588 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 NCAPG2Q86XI2 1143 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 KIF9Q9HAQ2 790 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 PRAMEF22A3QJZ6 481 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 OPHN1O60890 802 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 ADORA1P30542 326 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 RBBP5Q15291 538 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 C2CD5Q86YS7 1000 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 SLAIN2Q9P270 581 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 GSTA1P08263 222 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 GSTA2P09210 222 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 GSPT1P15170 499 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 OLA1Q9NTK5 396 aaKnown RBP13.92□□□□□ -0.18
SPG11-203ENST00000535302 I3L4J1 428 aa13.92□□□□□ -0.18
SPG11-203ENST00000535302 DNM2P50570 870 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms