RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 FAM83BQ5T0W9 1011 aa25.26■■□□□ 1.63
PKP3-211ENST00000534401 PXYLP1Q8TE99 480 aa25.26■■□□□ 1.63
PKP3-211ENST00000534401 FBXO28Q9NVF7 368 aa25.26■■□□□ 1.63
PKP3-211ENST00000534401 PPP1R9AQ9ULJ8 1098 aa25.26■■□□□ 1.63
PKP3-211ENST00000534401 COL11A1P12107 1806 aaPredicted RBP25.26■■□□□ 1.63
PKP3-211ENST00000534401 NMT2O60551 498 aa25.25■■□□□ 1.63
PKP3-211ENST00000534401 GRK4P32298 578 aa25.25■■□□□ 1.63
PKP3-211ENST00000534401 CCNA1P78396 465 aa25.25■■□□□ 1.63
PKP3-211ENST00000534401 NBPF11Q86T75 865 aa25.25■■□□□ 1.63
PKP3-211ENST00000534401 REPS2Q8NFH8 660 aa25.25■■□□□ 1.63
PKP3-211ENST00000534401 RAET1EQ8TD07 263 aa25.25■■□□□ 1.63
PKP3-211ENST00000534401 ATG4CQ96DT6 458 aa25.25■■□□□ 1.63
PKP3-211ENST00000534401 GMCL1Q96IK5 515 aa25.25■■□□□ 1.63
PKP3-211ENST00000534401 NEDD4P46934 1319 aa25.24■■□□□ 1.63
PKP3-211ENST00000534401 IMMTQ16891 758 aaKnown RBP25.24■■□□□ 1.63
PKP3-211ENST00000534401 MORN1Q5T089 497 aa25.24■■□□□ 1.63
PKP3-211ENST00000534401 RCSD1Q6JBY9 416 aa25.24■■□□□ 1.63
PKP3-211ENST00000534401 SLAIN1Q8ND83 568 aa25.24■■□□□ 1.63
PKP3-211ENST00000534401 SHCBP1Q8NEM2 672 aa25.24■■□□□ 1.63
PKP3-211ENST00000534401 MAP4K1Q92918 833 aa25.24■■□□□ 1.63
PKP3-211ENST00000534401 TTC14Q96N46 770 aa25.24■■□□□ 1.63
PKP3-211ENST00000534401 PLA2G6O60733 806 aa25.23■■□□□ 1.63
PKP3-211ENST00000534401 GPR142Q7Z601 462 aa25.23■■□□□ 1.63
PKP3-211ENST00000534401 LRRC47Q8N1G4 583 aaKnown RBP25.23■■□□□ 1.63
PKP3-211ENST00000534401 NUP88Q99567 741 aaPredicted RBP25.23■■□□□ 1.63
PKP3-211ENST00000534401 MOV10L1Q9BXT6 1211 aaKnown RBP25.23■■□□□ 1.63
PKP3-211ENST00000534401 SPATC1LQ9H0A9 340 aa25.23■■□□□ 1.63
PKP3-211ENST00000534401 VWA5AO00534 786 aa25.22■■□□□ 1.63
PKP3-211ENST00000534401 ADCY3O60266 1144 aa25.22■■□□□ 1.63
PKP3-211ENST00000534401 XRCC5P13010 732 aaKnown RBP25.22■■□□□ 1.63
PKP3-211ENST00000534401 SLFN13Q68D06 897 aa25.22■■□□□ 1.63
PKP3-211ENST00000534401 PLEKHH3Q7Z736 793 aa25.22■■□□□ 1.63
PKP3-211ENST00000534401 SH3TC2Q8TF17 1288 aa25.22■■□□□ 1.63
PKP3-211ENST00000534401 ESR2Q92731 530 aa25.22■■□□□ 1.63
PKP3-211ENST00000534401 PPP4R2Q9NY27 417 aa25.22■■□□□ 1.63
PKP3-211ENST00000534401 TMEM132BQ14DG7 1078 aa25.21■■□□□ 1.63
PKP3-211ENST00000534401 RRP12Q5JTH9 1297 aaKnown RBP25.21■■□□□ 1.63
PKP3-211ENST00000534401 PRPF38AQ8NAV1 312 aaKnown RBP25.21■■□□□ 1.63
PKP3-211ENST00000534401 SOCS4Q8WXH5 440 aa25.21■■□□□ 1.63
PKP3-211ENST00000534401 ANKS1AQ92625 1134 aa25.21■■□□□ 1.63
PKP3-211ENST00000534401 SLF1Q9BQI6 1058 aa25.21■■□□□ 1.63
PKP3-211ENST00000534401 ESYT1Q9BSJ8 1104 aa25.21■■□□□ 1.63
PKP3-211ENST00000534401 TOMM22Q9NS69 142 aa25.21■■□□□ 1.63
PKP3-211ENST00000534401 STX8Q9UNK0 236 aa25.21■■□□□ 1.63
PKP3-211ENST00000534401 U3KPZ7 1027 aaPredicted RBP25.21■■□□□ 1.63
PKP3-211ENST00000534401 TOP1P11387 765 aaKnown RBP25.2■■□□□ 1.62
PKP3-211ENST00000534401 NUDT12Q9BQG2 462 aa25.2■■□□□ 1.62
PKP3-211ENST00000534401 FEM1BQ9UK73 627 aa25.2■■□□□ 1.62
PKP3-211ENST00000534401 ZNF214Q9UL59 606 aaPredicted RBP25.2■■□□□ 1.62
PKP3-211ENST00000534401 ZNF236Q9UL36 1845 aa25.2■■□□□ 1.62
PKP3-211ENST00000534401 SLC15A5A6NIM6 579 aa25.19■■□□□ 1.62
PKP3-211ENST00000534401 ATP2A1O14983 1001 aa25.19■■□□□ 1.62
PKP3-211ENST00000534401 CYP21A2P08686 494 aa25.19■■□□□ 1.62
PKP3-211ENST00000534401 BMP3P12645 472 aa25.19■■□□□ 1.62
PKP3-211ENST00000534401 PTPREP23469 700 aa25.19■■□□□ 1.62
PKP3-211ENST00000534401 DGKHQ86XP1 1220 aa25.19■■□□□ 1.62
PKP3-211ENST00000534401 TMEM47Q9BQJ4 181 aa25.19■■□□□ 1.62
PKP3-211ENST00000534401 LSG1Q9H089 658 aaKnown RBP25.19■■□□□ 1.62
PKP3-211ENST00000534401 ZNFX1Q9P2E3 1918 aaKnown RBP25.19■■□□□ 1.62
PKP3-211ENST00000534401 STRNO43815 780 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 IGHA2P01877 340 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 HOXC6P09630 235 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 SOX10P56693 466 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 GRB14Q14449 540 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 CCDC178Q5BJE1 867 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 RIOX2Q8IUF8 465 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 KRT23Q9C075 422 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 CNNM2Q9H8M5 875 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 ZSWIM5Q9P217 1185 aa25.18■■□□□ 1.62
PKP3-211ENST00000534401 RAD21O60216 631 aa25.17■■□□□ 1.62
PKP3-211ENST00000534401 KDM4AO75164 1064 aa25.17■■□□□ 1.62
PKP3-211ENST00000534401 FDX1P10109 184 aa25.17■■□□□ 1.62
PKP3-211ENST00000534401 ELNP15502 786 aa25.17■■□□□ 1.62
PKP3-211ENST00000534401 MROH8Q9H579 483 aa25.17■■□□□ 1.62
PKP3-211ENST00000534401 B4E1Z4 1266 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 SLC25A27O95847 323 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 SNHG28P0DPA3 235 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 ERCC3P19447 782 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 MCCP23508 829 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 MAP2K5Q13163 448 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.16■■□□□ 1.62
PKP3-211ENST00000534401 CCAR1Q8IX12 1150 aaKnown RBP25.16■■□□□ 1.62
PKP3-211ENST00000534401 ABRAQ8N0Z2 381 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 DCAF4Q8WV16 495 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 SLC38A10Q9HBR0 1119 aa25.16■■□□□ 1.62
PKP3-211ENST00000534401 POTEFA5A3E0 1075 aa25.15■■□□□ 1.62
PKP3-211ENST00000534401 STAT3P40763 770 aa25.15■■□□□ 1.62
PKP3-211ENST00000534401 SLC1A4P43007 532 aa25.15■■□□□ 1.62
PKP3-211ENST00000534401 MTFR1Q15390 333 aa25.15■■□□□ 1.62
PKP3-211ENST00000534401 BTNL9Q6UXG8 535 aa25.15■■□□□ 1.62
PKP3-211ENST00000534401 FAM160B2Q86V87 743 aa25.15■■□□□ 1.62
PKP3-211ENST00000534401 TRMT44Q8IYL2 757 aaKnown RBP25.15■■□□□ 1.62
PKP3-211ENST00000534401 CHURC1Q8WUH1 139 aa25.15■■□□□ 1.62
PKP3-211ENST00000534401 TAF6LQ9Y6J9 622 aa25.15■■□□□ 1.62
PKP3-211ENST00000534401 TMEM232C9JQI7 657 aa25.14■■□□□ 1.62
PKP3-211ENST00000534401 COPB2P35606 906 aa25.14■■□□□ 1.62
PKP3-211ENST00000534401 RGS2P41220 211 aa25.14■■□□□ 1.62
PKP3-211ENST00000534401 UBXN2AP68543 259 aa25.14■■□□□ 1.62
PKP3-211ENST00000534401 MAP3K21Q5TCX8 1036 aa25.14■■□□□ 1.62
PKP3-211ENST00000534401 RBM8AQ9Y5S9 174 aaKnown RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms