RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 TATDN1Q6P1N9 297 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 CPLX2Q6PUV4 134 aaKnown RBP11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 SYNE3Q6ZMZ3 975 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 NFXL1Q6ZNB6 911 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 FAM43AQ8N2R8 423 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 CRACR2BQ8N4Y2 399 aaPredicted RBP11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 ABHD8Q96I13 439 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 WDR18Q9BV38 432 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 MCOLN1Q9GZU1 580 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 MKNK2Q9HBH9 465 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 SENP2Q9HC62 589 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 SAP30BPQ9UHR5 308 aaKnown RBP11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 SERPINB13Q9UIV8 391 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZHX2Q9Y6X8 837 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 STK36Q9NRP7 1315 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 PTPDC1A2A3K4 754 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 CALM1P0DP23 149 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 CALM2P0DP24 149 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 CALM3P0DP25 149 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 NOVP48745 357 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 CCT2P78371 535 aaKnown RBP11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 PABPC4Q13310 644 aaKnown RBP eCLIP11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 IFIT1BQ5T764 474 aaKnown RBP11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 MICU3Q86XE3 530 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZNF444Q8N0Y2 327 aaPredicted RBP11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZNF280CQ8ND82 737 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 NEDD1Q8NHV4 660 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 PARK7Q99497 189 aaKnown RBP11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 MAP3K14Q99558 947 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 MTMR6Q9Y217 621 aa11.72□□□□□ -0.53
LDLRAD3-206ENST00000534091 BAZ2BQ9UIF8 2168 aaKnown RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 GOLGA8AA7E2F4 631 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 DDX11L8A8MPP1 907 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 CPLX1O14810 134 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 JAK2O60674 1132 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 TSPY3P0CV98 308 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 TSPY8P0CW00 308 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZSCAN22P10073 491 aaPredicted RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 PTMSP20962 102 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 PRMT2P55345 433 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 TFAP4Q01664 338 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 MOGSQ13724 837 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 KIF22Q14807 665 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 NTRK3Q16288 839 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 FBXO46Q6PJ61 603 aaPredicted RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 FAM184AQ8NB25 1140 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 SLC44A5Q8NCS7 719 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZKSCAN3Q9BRR0 538 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 NCOA5Q9HCD5 579 aaKnown RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 FAM217BQ9NTX9 383 aaPredicted RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 RBM28Q9NW13 759 aaKnown RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 NAP1L2Q9ULW6 460 aaPredicted RBP11.71□□□□□ -0.53
LDLRAD3-206ENST00000534091 LOC285556D6RIA3 1793 aa11.71□□□□□ -0.54
LDLRAD3-206ENST00000534091 PDHXO00330 501 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 F13A1P00488 732 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 IFNAR1P17181 557 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 CDC27P30260 824 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 MCM4P33991 863 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 TROAPQ12815 778 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 RTN1Q16799 776 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 FAM47AQ5JRC9 791 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 CATIPQ7Z7H3 387 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 CCDC17Q96LX7 622 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 DNAJC18Q9H819 358 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 IL17RBQ9NRM6 502 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 ATP6V1DQ9Y5K8 247 aa11.7□□□□□ -0.54
LDLRAD3-206ENST00000534091 IGKV6D-41A0A0C4DH26 115 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 BAG4O95429 457 aaKnown RBP11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 FDPSP14324 419 aaKnown RBP11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 SHMT1P34896 483 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 BACE1P56817 501 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 SLC4A8Q2Y0W8 1093 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 GPAT2Q6NUI2 795 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 C17orf99Q6UX52 265 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 FANCBQ8NB91 859 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 GTF3C2Q8WUA4 911 aaPredicted RBP11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 R3HDMLQ9H3Y0 253 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 EFCC1Q9HA90 598 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 CABP5Q9NP86 173 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 ZBTB21Q9ULJ3 1066 aa11.69□□□□□ -0.54
LDLRAD3-206ENST00000534091 ADGRA2Q96PE1 1338 aa11.68□□□□□ -0.54
LDLRAD3-206ENST00000534091 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
LDLRAD3-206ENST00000534091 HOXD10P28358 340 aa11.68□□□□□ -0.54
LDLRAD3-206ENST00000534091 HOXA7P31268 230 aaPredicted RBP11.68□□□□□ -0.54
LDLRAD3-206ENST00000534091 ADD1P35611 737 aaKnown RBP11.68□□□□□ -0.54
LDLRAD3-206ENST00000534091 GCLCP48506 637 aaPredicted RBP11.68□□□□□ -0.54
LDLRAD3-206ENST00000534091 USP14P54578 494 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms