RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 POLA2Q14181 598 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 DEPTORQ8TB45 409 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 CPLX3Q8WVH0 158 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 TTC14Q96N46 770 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 NEURL4Q96JN8 1562 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 MACROD2A1Z1Q3 448 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 P4HA1P13674 534 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 STAT2P52630 851 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 DACT1Q9NYF0 836 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 RTEL1Q9NZ71 1219 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 TMCO5BA8MYB1 307 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 SYT1P21579 422 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 PPM1FP49593 454 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 UBASH3AP57075 661 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 SMC1AQ14683 1233 aaKnown RBP12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 SF3B3Q15393 1217 aaKnown RBP12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 C8orf34Q49A92 452 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 TMC6Q7Z403 805 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 ZNF830Q96NB3 372 aaPredicted RBP12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 RSPH14Q9UHP6 348 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 GINS2Q9Y248 185 aa12.57□□□□□ -0.4
AMBRA1-211ENST00000533727 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 SASH1O94885 1247 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 GCFC2P16383 781 aaKnown RBP12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 MECOMQ03112 1051 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 RPS12P25398 132 aaKnown RBP12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 TFDP1Q14186 410 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 AOC3Q16853 763 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 NEK8Q86SG6 692 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 DDX39AO00148 427 aaKnown RBP12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 GNG11P61952 73 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 IFFO1Q0D2I5 559 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 ODR4Q5SWX8 454 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 SPOUT1Q5T280 376 aaKnown RBP12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 GOLGA5Q8TBA6 731 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 FAM200AQ8TCP9 573 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 EDC3Q96F86 508 aaKnown RBP12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 HOXC10Q9NYD6 342 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 OGFRQ9NZT2 677 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 ATP6V0A2Q9Y487 856 aa12.56□□□□□ -0.4
AMBRA1-211ENST00000533727 RASGRF1Q13972 1273 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 PLA2G4DQ86XP0 818 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 CCDC113Q9H0I3 377 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 HACL1Q9UJ83 578 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 GSTTP1A0A1W2PQM5 241 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 TRAF5O00463 557 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 COA7Q96BR5 231 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 RFX1P22670 979 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 PPP2R5AQ15172 486 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 TBC1D10BQ4KMP7 808 aaPredicted RBP12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 CABP7Q86V35 215 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 MYL10Q9BUA6 226 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 ZNF277Q9NRM2 450 aaPredicted RBP12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 SLU7O95391 586 aaKnown RBP12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 HARSP12081 509 aaKnown RBP12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 DCAF4Q8WV16 495 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 WDR11Q9BZH6 1224 aa12.55□□□□□ -0.4
AMBRA1-211ENST00000533727 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 SYDE2Q5VT97 1194 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 GTF3C6Q969F1 213 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 RNF26Q9BY78 433 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 RASSF4Q9H2L5 321 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 HERC5Q9UII4 1024 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 KCNH3Q9ULD8 1083 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 LAD1O00515 517 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 XPOTO43592 962 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 PFKFB2O60825 505 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 CCND2P30279 289 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 RRAGDQ9NQL2 400 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 RGL2O15211 777 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 TTC31Q49AM3 519 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 STRIP1Q5VSL9 837 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 CCDC186Q7Z3E2 898 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 CELF1Q92879 486 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 KRT83P78385 493 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 HERC4Q5GLZ8 1057 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 SPECC1LQ69YQ0 1117 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 MYCT1Q8N699 235 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 ZNF215Q9UL58 517 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-211ENST00000533727 TUBB4AP04350 444 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 SKILP12757 684 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms