RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 RC3H2Q9HBD1 1191 aaKnown RBP4.39□□□□□ -1.71
ATM-220ENST00000533526 MBNL3Q9NUK0 354 aaKnown RBP4.39□□□□□ -1.71
ATM-220ENST00000533526 ZNF214Q9UL59 606 aaPredicted RBP4.39□□□□□ -1.71
ATM-220ENST00000533526 A0A087WZG4 1122 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 SSU72P8A0A1W2PR75 194 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 JUNBP17275 347 aaPredicted RBP4.38□□□□□ -1.71
ATM-220ENST00000533526 TAL1P17542 331 aaPredicted RBP4.38□□□□□ -1.71
ATM-220ENST00000533526 ENDOUP21128 410 aaKnown RBP4.38□□□□□ -1.71
ATM-220ENST00000533526 LTKP29376 864 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 GDNFP39905 211 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 AFMP43652 599 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 EGR3Q06889 387 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 TCEAL1Q15170 157 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 RNF111Q6ZNA4 994 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 C7orf61Q8IZ16 206 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 ANAPC16Q96DE5 110 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 ZNF512BQ96KM6 892 aaPredicted RBP4.38□□□□□ -1.71
ATM-220ENST00000533526 HDAC8Q9BY41 377 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 CHST7Q9NS84 486 aa4.38□□□□□ -1.71
ATM-220ENST00000533526 FAM86C2PA6NEL3 165 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 WASH4PA8MWX3 477 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 C9IYK1 514 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 DNAJA1P31689 397 aaKnown RBP4.37□□□□□ -1.71
ATM-220ENST00000533526 PCBP3P57721 371 aaKnown RBP4.37□□□□□ -1.71
ATM-220ENST00000533526 SLC7A5Q01650 507 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 ZYXQ15942 572 aaKnown RBP4.37□□□□□ -1.71
ATM-220ENST00000533526 GNPTABQ3T906 1256 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 NOL9Q5SY16 702 aaKnown RBP4.37□□□□□ -1.71
ATM-220ENST00000533526 MCTP1Q6DN14 999 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 USHBP1Q8N6Y0 703 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 LINC00116Q8NCU8 138 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 LRRN4CLQ8ND94 238 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 ASIC4Q96FT7 647 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 TCTN2Q96GX1 697 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 ADAMTS6Q9UKP5 1117 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 LTBP3Q9NS15 1303 aa4.37□□□□□ -1.71
ATM-220ENST00000533526 SHISA3A0PJX4 238 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 PRAMEF1O95521 474 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 FGRP09769 529 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 ITGB5P18084 799 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 CD247P20963 164 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 NOP2P46087 812 aaKnown RBP4.36□□□□□ -1.71
ATM-220ENST00000533526 DUSP4Q13115 394 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 NAALADL2Q58DX5 795 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 TMC3Q7Z5M5 1100 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 SPPL2CQ8IUH8 684 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 FLAD1Q8NFF5 587 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 C8orf37Q96NL8 207 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 GP6Q9HCN6 339 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 PRDM7Q9NQW5 492 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 SLAMF8Q9P0V8 285 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 PRKAG3Q9UGI9 489 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 TMEM59LQ9UK28 342 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 CTNND2Q9UQB3 1225 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 DIS3Q9Y2L1 958 aaKnown RBP4.36□□□□□ -1.71
ATM-220ENST00000533526 R3HCC1Q9Y3T6 440 aaKnown RBP4.36□□□□□ -1.71
ATM-220ENST00000533526 PCDHA11Q9Y5I1 949 aa4.36□□□□□ -1.71
ATM-220ENST00000533526 PAX4O43316 350 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 PPM1BO75688 479 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 TP53P04637 393 aaPredicted RBP4.35□□□□□ -1.71
ATM-220ENST00000533526 GSNP06396 782 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 NAT2P11245 290 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 ITGA4P13612 1032 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 RAC2P15153 192 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 BMP8BP34820 402 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 TEKQ02763 1124 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 CHRNEQ04844 493 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 SNW1Q13573 536 aaKnown RBP4.35□□□□□ -1.71
ATM-220ENST00000533526 NCAPHQ15003 741 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 AXDND1Q5T1B0 1012 aaPredicted RBP4.35□□□□□ -1.71
ATM-220ENST00000533526 CWF19L1Q69YN2 538 aaKnown RBP4.35□□□□□ -1.71
ATM-220ENST00000533526 HEATR6Q6AI08 1181 aaKnown RBP4.35□□□□□ -1.71
ATM-220ENST00000533526 PPFIBP1Q86W92 1011 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 OXR1Q8N573 874 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 FAM169BQ8N8A8 192 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 PDZD8Q8NEN9 1154 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 DSCC1Q9BVC3 393 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 GBP3Q9H0R5 595 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 ADAMTS10Q9H324 1103 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 GFOD1Q9NXC2 390 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 ACTR10Q9NZ32 417 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 TCFL5Q9UL49 500 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 ZNF281Q9Y2X9 895 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 SF3B6Q9Y3B4 125 aaKnown RBP4.35□□□□□ -1.71
ATM-220ENST00000533526 FHOD1Q9Y613 1164 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 MRVI1Q9Y6F6 885 aa4.35□□□□□ -1.71
ATM-220ENST00000533526 DNAJC25-GNG10A0A024R161 153 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 SMAD7O15105 426 aaKnown RBP4.34□□□□□ -1.71
ATM-220ENST00000533526 SHOXO15266 292 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 SYPP08247 313 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 ETFBP38117 255 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 ZNF143P52747 638 aaPredicted RBP4.34□□□□□ -1.71
ATM-220ENST00000533526 FXNQ16595 210 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 TDRD10Q5VZ19 366 aaKnown RBP4.34□□□□□ -1.71
ATM-220ENST00000533526 DCAF15Q66K64 600 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 VHLLQ6RSH7 139 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 ADAT2Q7Z6V5 191 aaKnown RBP4.34□□□□□ -1.71
ATM-220ENST00000533526 MCF2L2Q86YR7 1114 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 ANKS4BQ8N8V4 417 aa4.34□□□□□ -1.71
ATM-220ENST00000533526 APBA2Q99767 749 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms