RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ESR2Q92731 530 aa24.16■■□□□ 1.46
CCS-208ENST00000533244 MAP4K1Q92918 833 aa24.16■■□□□ 1.46
CCS-208ENST00000533244 COA7Q96BR5 231 aa24.16■■□□□ 1.46
CCS-208ENST00000533244 ATG4CQ96DT6 458 aa24.16■■□□□ 1.46
CCS-208ENST00000533244 NUP88Q99567 741 aaPredicted RBP24.16■■□□□ 1.46
CCS-208ENST00000533244 PPP1R9AQ9ULJ8 1098 aa24.16■■□□□ 1.46
CCS-208ENST00000533244 U3KPZ7 1027 aaPredicted RBP24.16■■□□□ 1.46
CCS-208ENST00000533244 CENPFP49454 3210 aa24.15■■□□□ 1.46
CCS-208ENST00000533244 MAPK4P31152 587 aa24.15■■□□□ 1.46
CCS-208ENST00000533244 FLT3LGP49771 235 aa24.15■■□□□ 1.46
CCS-208ENST00000533244 GJD2Q9UKL4 321 aa24.15■■□□□ 1.46
CCS-208ENST00000533244 RAD21O60216 631 aa24.14■■□□□ 1.45
CCS-208ENST00000533244 CCNA1P78396 465 aa24.14■■□□□ 1.45
CCS-208ENST00000533244 SLFN13Q68D06 897 aa24.14■■□□□ 1.45
CCS-208ENST00000533244 RCSD1Q6JBY9 416 aa24.14■■□□□ 1.45
CCS-208ENST00000533244 GMCL1Q96IK5 515 aa24.14■■□□□ 1.45
CCS-208ENST00000533244 CYP21A2P08686 494 aa24.13■■□□□ 1.45
CCS-208ENST00000533244 SLC9C1Q4G0N8 1177 aa24.13■■□□□ 1.45
CCS-208ENST00000533244 RAET1EQ8TD07 263 aa24.13■■□□□ 1.45
CCS-208ENST00000533244 ZNF333Q96JL9 665 aa24.13■■□□□ 1.45
CCS-208ENST00000533244 LSG1Q9H089 658 aaKnown RBP24.13■■□□□ 1.45
CCS-208ENST00000533244 COL11A1P12107 1806 aaPredicted RBP24.12■■□□□ 1.45
CCS-208ENST00000533244 REPS2Q8NFH8 660 aa24.12■■□□□ 1.45
CCS-208ENST00000533244 TTC14Q96N46 770 aa24.12■■□□□ 1.45
CCS-208ENST00000533244 SPATC1LQ9H0A9 340 aa24.12■■□□□ 1.45
CCS-208ENST00000533244 CNNM2Q9H8M5 875 aa24.12■■□□□ 1.45
CCS-208ENST00000533244 B4E1Z4 1266 aa24.11■■□□□ 1.45
CCS-208ENST00000533244 KDM4AO75164 1064 aa24.11■■□□□ 1.45
CCS-208ENST00000533244 TOP1P11387 765 aaKnown RBP24.11■■□□□ 1.45
CCS-208ENST00000533244 BMP3P12645 472 aa24.11■■□□□ 1.45
CCS-208ENST00000533244 GPR142Q7Z601 462 aa24.11■■□□□ 1.45
CCS-208ENST00000533244 SLF1Q9BQI6 1058 aa24.11■■□□□ 1.45
CCS-208ENST00000533244 TMEM47Q9BQJ4 181 aa24.11■■□□□ 1.45
CCS-208ENST00000533244 MOV10L1Q9BXT6 1211 aaKnown RBP24.11■■□□□ 1.45
CCS-208ENST00000533244 KRT23Q9C075 422 aa24.11■■□□□ 1.45
CCS-208ENST00000533244 VWA5AO00534 786 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 CDC45O75419 566 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 GRK4P32298 578 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 TMEM132BQ14DG7 1078 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 PLEKHH3Q7Z736 793 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 SLAIN1Q8ND83 568 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 SHCBP1Q8NEM2 672 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 PXYLP1Q8TE99 480 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 SH3TC2Q8TF17 1288 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 USP6NLQ92738 828 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 FEM1BQ9UK73 627 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 RBM8AQ9Y5S9 174 aaKnown RBP24.1■■□□□ 1.45
CCS-208ENST00000533244 MORN1Q5T089 497 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 NBPF11Q86T75 865 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 PRPF38AQ8NAV1 312 aaKnown RBP24.1■■□□□ 1.45
CCS-208ENST00000533244 SOCS4Q8WXH5 440 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 ZSWIM5Q9P217 1185 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 ZNF214Q9UL59 606 aaPredicted RBP24.1■■□□□ 1.45
CCS-208ENST00000533244 TAF6LQ9Y6J9 622 aa24.1■■□□□ 1.45
CCS-208ENST00000533244 RBBP6Q7Z6E9 1792 aaKnown RBP24.09■■□□□ 1.45
CCS-208ENST00000533244 KIAA1211Q6ZU35 1233 aa24.09■■□□□ 1.45
CCS-208ENST00000533244 RASGRP2Q7LDG7 609 aa24.09■■□□□ 1.45
CCS-208ENST00000533244 IQCA1Q86XH1 822 aa24.09■■□□□ 1.45
CCS-208ENST00000533244 DGKHQ86XP1 1220 aa24.09■■□□□ 1.45
CCS-208ENST00000533244 ANKS1AQ92625 1134 aa24.09■■□□□ 1.45
CCS-208ENST00000533244 ZNF236Q9UL36 1845 aa24.08■■□□□ 1.45
CCS-208ENST00000533244 ADCY3O60266 1144 aa24.08■■□□□ 1.44
CCS-208ENST00000533244 PLA2G6O60733 806 aa24.08■■□□□ 1.44
CCS-208ENST00000533244 MCCP23508 829 aa24.08■■□□□ 1.44
CCS-208ENST00000533244 SLC1A4P43007 532 aa24.08■■□□□ 1.44
CCS-208ENST00000533244 CCDC178Q5BJE1 867 aa24.08■■□□□ 1.44
CCS-208ENST00000533244 CCAR1Q8IX12 1150 aaKnown RBP24.08■■□□□ 1.44
CCS-208ENST00000533244 DCAF4Q8WV16 495 aa24.08■■□□□ 1.44
CCS-208ENST00000533244 NUDT12Q9BQG2 462 aa24.08■■□□□ 1.44
CCS-208ENST00000533244 ZKSCAN3Q9BRR0 538 aa24.08■■□□□ 1.44
CCS-208ENST00000533244 PTPREP23469 700 aa24.07■■□□□ 1.44
CCS-208ENST00000533244 SAMD1Q6SPF0 538 aaPredicted RBP24.07■■□□□ 1.44
CCS-208ENST00000533244 ZSCAN10Q96SZ4 725 aaPredicted RBP24.07■■□□□ 1.44
CCS-208ENST00000533244 TMEM232C9JQI7 657 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 E7EWF7 191 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 ATP2A1O14983 1001 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 XRCC5P13010 732 aaKnown RBP24.06■■□□□ 1.44
CCS-208ENST00000533244 ELNP15502 786 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 ERCC3P19447 782 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 STAT2P52630 851 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 GRB14Q14449 540 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 CASC1Q6TDU7 716 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 STOX1Q6ZVD7 989 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 FAM160B2Q86V87 743 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 MROH8Q9H579 483 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 SLC38A10Q9HBR0 1119 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 ANO2Q9NQ90 1003 aa24.06■■□□□ 1.44
CCS-208ENST00000533244 SLC15A5A6NIM6 579 aa24.05■■□□□ 1.44
CCS-208ENST00000533244 SNHG28P0DPA3 235 aa24.05■■□□□ 1.44
CCS-208ENST00000533244 RGS19P49795 217 aa24.05■■□□□ 1.44
CCS-208ENST00000533244 SOX10P56693 466 aa24.05■■□□□ 1.44
CCS-208ENST00000533244 CYB5R4Q7L1T6 521 aa24.05■■□□□ 1.44
CCS-208ENST00000533244 RIOX2Q8IUF8 465 aa24.05■■□□□ 1.44
CCS-208ENST00000533244 ENAHQ8N8S7 591 aaPredicted RBP24.05■■□□□ 1.44
CCS-208ENST00000533244 KIFC2Q96AC6 838 aa24.05■■□□□ 1.44
CCS-208ENST00000533244 TNKSO95271 1327 aa24.05■■□□□ 1.44
CCS-208ENST00000533244 SLC25A27O95847 323 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 FDX1P10109 184 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 PDHBP11177 359 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 STAT3P40763 770 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms