RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 IL25Q9H293 177 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 CLIP2Q9UDT6 1046 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 MYH8P13535 1937 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 CENPFP49454 3210 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 DOCK3Q8IZD9 2030 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 SLC15A5A6NIM6 579 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 STRNO43815 780 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 INHAP05111 366 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 PCP11498 1178 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 ELNP15502 786 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 RGS2P41220 211 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 GJA8P48165 433 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 NT5C2P49902 561 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 TFAP4Q01664 338 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 RNF208Q9H0X6 261 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 ANO2Q9NQ90 1003 aa15.31■□□□□ 0.04
TRAPPC4-212ENST00000533058 HOXC6P09630 235 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 PTPREP23469 700 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 NOVP48745 357 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 GMCL1P1Q8NEA9 526 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 DSCC1Q9BVC3 393 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 MOV10L1Q9BXT6 1211 aaKnown RBP15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 SPATC1LQ9H0A9 340 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 UNC93B1Q9H1C4 597 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 PAK6Q9NQU5 681 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 PPP1R9AQ9ULJ8 1098 aa15.3■□□□□ 0.04
TRAPPC4-212ENST00000533058 NDUFB10O96000 172 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 CTDSPL2Q05D32 466 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 MAP2K5Q13163 448 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 GRB14Q14449 540 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 FAM47AQ5JRC9 791 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 FAM83BQ5T0W9 1011 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 MAP3K21Q5TCX8 1036 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 ABRAQ8N0Z2 381 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 TRIB2Q92519 343 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 ATG4CQ96DT6 458 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 APBA2Q99767 749 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 MROH8Q9H579 483 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 IVNS1ABPQ9Y6Y0 642 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 RLFQ13129 1914 aa15.29■□□□□ 0.04
TRAPPC4-212ENST00000533058 RPTORQ8N122 1335 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 TSPY2A6NKD2 308 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 VWA5AO00534 786 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 SGPL1O95470 568 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 SLC25A27O95847 323 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 MYCP01106 439 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 CYP2B6P20813 491 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 HAND2P61296 217 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 PTH1RQ03431 593 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 PRPF38AQ8NAV1 312 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 U2AF1L4Q8WU68 220 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 SHISA4Q96DD7 197 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 CWC22Q9HCG8 908 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 TOMM22Q9NS69 142 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 TCP11L1Q9NUJ3 509 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 TACC3Q9Y6A5 838 aa15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-212ENST00000533058 ZNF213O14771 459 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 ERCC3P19447 782 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 COPB2P35606 906 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 TMEM132BQ14DG7 1078 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 IMMTQ16891 758 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 REPS2Q8NFH8 660 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 STAG1Q8WVM7 1258 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 SLF1Q9BQI6 1058 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 RNF41Q9H4P4 317 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 IL17RBQ9NRM6 502 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 FBXO28Q9NVF7 368 aa15.27■□□□□ 0.04
TRAPPC4-212ENST00000533058 A0A0G2JMZ2 1700 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 ATP2A1O14983 1001 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 RANBP6O60518 1105 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 REC8O95072 547 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 IGHA2P01877 340 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 FDX1P10109 184 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 ZKSCAN1P17029 563 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 STAT3P40763 770 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 AKNAD1Q5T1N1 836 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 WDR78Q5VTH9 848 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 UBE2Q1Q7Z7E8 422 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 RIOX2Q8IUF8 465 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 GMCL1Q96IK5 515 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 CRISPLD2Q9H0B8 497 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 HMX1Q9NP08 348 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 INCENPQ9NQS7 918 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 FEM1BQ9UK73 627 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 ZNF214Q9UL59 606 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 PLXNB2O15031 1838 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 PDE4DIPQ5VU43 2346 aa15.26■□□□□ 0.03
TRAPPC4-212ENST00000533058 RAD21O60216 631 aa15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 PLA2G6O60733 806 aa15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 RRP12Q5JTH9 1297 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 SLFN13Q68D06 897 aa15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 MFSD6Q6ZSS7 791 aa15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 TTC14Q96N46 770 aa15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 LSG1Q9H089 658 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 NBPF3Q9H094 633 aa15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 SLC5A4Q9NY91 659 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms