RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 PLIN4Q96Q06 1357 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 GRM8O00222 908 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 GLP2RO95838 553 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 GNRH1P01148 92 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 COL9A1P20849 921 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 EDNRBP24530 442 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 CAP2P40123 477 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 ARID2Q68CP9 1835 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 APOBEC3FQ8IUX4 373 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 CCDC146Q8IYE0 955 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 C16orf71Q8IYS4 520 aaPredicted RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 DEFB118Q96PH6 123 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 NOP58Q9Y2X3 529 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 PROB1E7EW31 1015 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 NRG2O14511 850 aaPredicted RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 MYOGP15173 224 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 PRMT2P55345 433 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 TRIM26Q12899 539 aaPredicted RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 MFSD14BQ5SR56 506 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 RBM26Q5T8P6 1007 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 DDX46Q7L014 1031 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 TSPYL4Q9UJ04 414 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 DBNLQ9UJU6 430 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 GOLGA4Q13439 2230 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 PCDH15Q96QU1 1955 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 LCHNA4D1U4 455 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 PI4K2BG5E9Z4 385 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 SMAD3P84022 425 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 FAM47AQ5JRC9 791 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 TAPT1Q6NXT6 567 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 ZNF512BQ96KM6 892 aaPredicted RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 TOX2Q96NM4 488 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 PHF24Q9UPV7 400 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 HOXB3P14651 431 aaPredicted RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 ZNF579Q8NAF0 562 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 VN1R2Q8NFZ6 395 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 MYLIPQ8WY64 445 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 RPGRQ92834 1020 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 CDCA7LQ96GN5 454 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 ASB2Q96Q27 587 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 ANTXR1Q9H6X2 564 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 CWC25Q9NXE8 425 aaPredicted RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 EPPK1P58107 5090 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 RALGAPA1Q6GYQ0 2036 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 ABCA4P78363 2273 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 ENTPD3O75355 529 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 FGRP09769 529 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 RGS3P49796 1198 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 AIMP1Q12904 312 aaKnown RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 CBX2Q14781 532 aaPredicted RBP2.3□□□□□ -2.04
KNL1-211ENST00000533001 MIGA2Q7L4E1 593 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 LINC01599Q8WXQ3 324 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 KAT2BQ92831 832 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 NELL1Q92832 810 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 RUNDC1Q96C34 613 aa2.3□□□□□ -2.04
KNL1-211ENST00000533001 U2SURPO15042 1029 aaKnown RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 FARP2O94887 1054 aaPredicted RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 TMEM132BQ14DG7 1078 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 SCYL3Q8IZE3 742 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 MAML2Q8IZL2 1156 aaPredicted RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 EAF2Q96CJ1 260 aaPredicted RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 WRNIP1Q96S55 665 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 OSBPL5Q9H0X9 879 aaPredicted RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 CLEC11AQ9Y240 323 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 TMEM265A0A087WTH1 108 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 RBM47A0AV96 593 aaKnown RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 TM4SF5O14894 197 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 TIMM10P62072 90 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 LRRC41Q15345 812 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 CCDC62Q6P9F0 684 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 FAM133AQ8N9E0 248 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 MSLNLQ96KJ4 702 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 ZMYND8Q9ULU4 1186 aaPredicted RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 FLT1P17948 1338 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 POTEMA6NI47 508 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 DNAJB2P25686 324 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 NHLH1Q02575 133 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 MAP3K12Q12852 859 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 FZD5Q13467 585 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 PROCA1Q8NCQ7 364 aaPredicted RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 SLAIN1Q8ND83 568 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 SLC17A8Q8NDX2 589 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 SSH3Q8TE77 659 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 GCC1Q96CN9 775 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 MEIS3Q99687 375 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 HIVEP2P31629 2446 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 MROH5Q6ZUA9 1318 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 ELL2O00472 640 aaPredicted RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 ATP2A1O14983 1001 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 ADAMTS3O15072 1205 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 HOXC13P31276 330 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 PRKG1Q13976 671 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 HSP90AB3PQ58FF7 597 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 AKNAD1Q5T1N1 836 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 CCDC102BQ68D86 513 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 DNAAF4Q8WXU2 420 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 DCPSQ96C86 337 aaKnown RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 URB1O60287 2271 aaKnown RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 C10orf142B7Z368 130 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms