RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 PPATQ06203 517 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 ST3GAL1Q11201 340 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 SPP2Q13103 211 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 MTMR2Q13614 643 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 BECN1Q14457 450 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
COL16A1-217ENST00000532877 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 GTF3C6Q969F1 213 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 OPTNQ96CV9 577 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 OTUD5Q96G74 571 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 SLKQ9H2G2 1235 aaPredicted RBP16.69■□□□□ 0.26
COL16A1-217ENST00000532877 GOPCQ9HD26 462 aa16.69■□□□□ 0.26
COL16A1-217ENST00000532877 F5H6K3 240 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 RAD21O60216 631 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 NDUFB10O96000 172 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 SNHG28P0DPA3 235 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 BACE1P56817 501 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 CCT2P78371 535 aaKnown RBP16.68■□□□□ 0.26
COL16A1-217ENST00000532877 KIF23Q02241 960 aaPredicted RBP16.68■□□□□ 0.26
COL16A1-217ENST00000532877 KLRC3Q07444 240 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 SCRN1Q12765 414 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 PPIL2Q13356 520 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 GRM4Q14833 912 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 RTN1Q16799 776 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 KIAA1755Q5JYT7 1200 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 CHMP4CQ96CF2 233 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 SLC10A4Q96EP9 437 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 MAP3K14Q99558 947 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 VCPKMTQ9H867 229 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 NCOA5Q9HCD5 579 aaKnown RBP16.68■□□□□ 0.26
COL16A1-217ENST00000532877 LOC285556D6RIA3 1793 aa16.68■□□□□ 0.26
COL16A1-217ENST00000532877 IRF6O14896 467 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 CDC27P30260 824 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 GJA5P36382 358 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 USP14P54578 494 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 SLFN13Q68D06 897 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 CCDC83Q8IWF9 413 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 SPICE1Q8N0Z3 855 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 FANCBQ8NB91 859 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 CTCFLQ8NI51 663 aaPredicted RBP16.67■□□□□ 0.26
COL16A1-217ENST00000532877 DCAF4Q8WV16 495 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 CCDC102AQ96A19 550 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 GMCL1Q96IK5 515 aa16.67■□□□□ 0.26
COL16A1-217ENST00000532877 FAM217BQ9NTX9 383 aaPredicted RBP16.67■□□□□ 0.26
COL16A1-217ENST00000532877 SLC10A3P09131 477 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
COL16A1-217ENST00000532877 KIF5BP33176 963 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 SLC1A4P43007 532 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 HMGCS2P54868 508 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 USP17L2Q6R6M4 530 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 CTU1Q7Z7A3 348 aaKnown RBP16.66■□□□□ 0.26
COL16A1-217ENST00000532877 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 RBM28Q9NW13 759 aaKnown RBP16.66■□□□□ 0.26
COL16A1-217ENST00000532877 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 KCNH4Q9UQ05 1017 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 FRMPD2Q68DX3 1309 aaPredicted RBP16.66■□□□□ 0.26
COL16A1-217ENST00000532877 CENPFP49454 3210 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 BRCA2P51587 3418 aa16.66■□□□□ 0.26
COL16A1-217ENST00000532877 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
COL16A1-217ENST00000532877 C19orf81C9J6K1 198 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 TRPA1O75762 1119 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 GOLGA8HP0CJ92 632 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 ZNF543Q08ER8 600 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 CUL4AQ13619 759 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 PPP2R5BQ15173 497 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 CCDC96Q2M329 555 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 ASPRV1Q53RT3 343 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 STAG2Q8N3U4 1231 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 LPAR1Q92633 364 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 C12orf42Q96LP6 360 aa16.65■□□□□ 0.26
COL16A1-217ENST00000532877 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
COL16A1-217ENST00000532877 A0A0G2JLL6 359 aaPredicted RBP16.64■□□□□ 0.25
COL16A1-217ENST00000532877 CCDC196A0A1B0GTZ2 297 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 CXCL11O14625 94 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 PLEKHA8P1O95397 391 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 BMP3P12645 472 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 VCAM1P19320 739 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 ADD1P35611 737 aaKnown RBP16.64■□□□□ 0.25
COL16A1-217ENST00000532877 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 FAM83BQ5T0W9 1011 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 GPATCH4Q5T3I0 446 aaKnown RBP16.64■□□□□ 0.25
COL16A1-217ENST00000532877 TMTC3Q6ZXV5 915 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
COL16A1-217ENST00000532877 PRRT2Q7Z6L0 340 aaPredicted RBP16.64■□□□□ 0.25
COL16A1-217ENST00000532877 ISY1Q9ULR0 285 aaKnown RBP16.64■□□□□ 0.25
COL16A1-217ENST00000532877 CPLX1O14810 134 aa16.63■□□□□ 0.25
COL16A1-217ENST00000532877 WDR46O15213 610 aaKnown RBP16.63■□□□□ 0.25
COL16A1-217ENST00000532877 DHX16O60231 1041 aaKnown RBP16.63■□□□□ 0.25
COL16A1-217ENST00000532877 ZBTB48P10074 688 aaPredicted RBP16.63■□□□□ 0.25
COL16A1-217ENST00000532877 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
COL16A1-217ENST00000532877 SPRYD7Q5W111 196 aa16.63■□□□□ 0.25
COL16A1-217ENST00000532877 RASAL3Q86YV0 1011 aa16.63■□□□□ 0.25
COL16A1-217ENST00000532877 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
COL16A1-217ENST00000532877 GPCPD1Q9NPB8 672 aa16.63■□□□□ 0.25
COL16A1-217ENST00000532877 TMOD4Q9NZQ9 345 aa16.63■□□□□ 0.25
COL16A1-217ENST00000532877 RBBP6Q7Z6E9 1792 aaKnown RBP16.63■□□□□ 0.25
COL16A1-217ENST00000532877 PARP14Q460N5 1801 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms