RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 KLHL3Q9UH77 587 aa11.12□□□□□ -0.63
KNL1-209ENST00000532347 NCOA2Q15596 1464 aa11.12□□□□□ -0.63
KNL1-209ENST00000532347 FAM95CA0A1B0GW59 222 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 SLC22A31A6NKX4 558 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 MEIS3P2A8K0S8 358 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 UPK3BL1B0FP48 263 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 UPK3BL2E5RIL1 263 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 GTF2F1P35269 517 aaKnown RBP eCLIP11.11□□□□□ -0.63
KNL1-209ENST00000532347 MAP7Q14244 749 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 LRRFIP1Q32MZ4 808 aaKnown RBP11.11□□□□□ -0.63
KNL1-209ENST00000532347 SLC6A19Q695T7 634 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 OVOS1Q6IE37 1185 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 BEND4Q6ZU67 534 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 TMEM40Q8WWA1 233 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 ZNF408Q9H9D4 720 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 UBR1Q8IWV7 1749 aa11.11□□□□□ -0.63
KNL1-209ENST00000532347 MAP3K1Q13233 1512 aa11.1□□□□□ -0.63
KNL1-209ENST00000532347 CHURC1-FNTBB4DL54 471 aa11.1□□□□□ -0.63
KNL1-209ENST00000532347 CAP2P40123 477 aa11.1□□□□□ -0.63
KNL1-209ENST00000532347 LSRQ86X29 649 aaPredicted RBP11.1□□□□□ -0.63
KNL1-209ENST00000532347 FAM13CQ8NE31 585 aa11.1□□□□□ -0.63
KNL1-209ENST00000532347 DPH2Q9BQC3 489 aaPredicted RBP11.1□□□□□ -0.63
KNL1-209ENST00000532347 TPSG1Q9NRR2 321 aa11.1□□□□□ -0.63
KNL1-209ENST00000532347 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
KNL1-209ENST00000532347 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
KNL1-209ENST00000532347 DUOX2Q9NRD8 1548 aa11.09□□□□□ -0.63
KNL1-209ENST00000532347 STRCP1A6NGW2 1772 aa11.09□□□□□ -0.63
KNL1-209ENST00000532347 ETFBP38117 255 aa11.09□□□□□ -0.63
KNL1-209ENST00000532347 PRAMEF13Q5VWM6 474 aa11.09□□□□□ -0.63
KNL1-209ENST00000532347 ARMCX6Q7L4S7 300 aa11.09□□□□□ -0.63
KNL1-209ENST00000532347 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
KNL1-209ENST00000532347 IGSF3O75054 1194 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 YARSP54577 528 aaKnown RBP11.08□□□□□ -0.64
KNL1-209ENST00000532347 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 ARSHQ5FYA8 562 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 SEZ6L2Q6UXD5 910 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 CLEC10AQ8IUN9 316 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 SLFN12Q8IYM2 578 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 FAM169BQ8N8A8 192 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 ARMC5Q96C12 935 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 ATG4CQ96DT6 458 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 FAM83CQ9BQN1 747 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 FOXQ1Q9C009 403 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 ERBINQ96RT1 1412 aa11.08□□□□□ -0.64
KNL1-209ENST00000532347 NKTRP30414 1462 aaKnown RBP11.07□□□□□ -0.64
KNL1-209ENST00000532347 STK10O94804 968 aaKnown RBP11.07□□□□□ -0.64
KNL1-209ENST00000532347 LRIG2O94898 1065 aa11.07□□□□□ -0.64
KNL1-209ENST00000532347 CST3P01034 146 aaPredicted RBP11.07□□□□□ -0.64
KNL1-209ENST00000532347 PAOXQ6QHF9 649 aa11.07□□□□□ -0.64
KNL1-209ENST00000532347 RUFY4Q6ZNE9 571 aa11.07□□□□□ -0.64
KNL1-209ENST00000532347 NLRC3Q7RTR2 1065 aa11.07□□□□□ -0.64
KNL1-209ENST00000532347 OR6P1Q8NGX9 317 aa11.07□□□□□ -0.64
KNL1-209ENST00000532347 PSMG3-AS1Q96PY0 264 aa11.07□□□□□ -0.64
KNL1-209ENST00000532347 CNNM2Q9H8M5 875 aa11.07□□□□□ -0.64
KNL1-209ENST00000532347 C1GALT1Q9NS00 363 aa11.07□□□□□ -0.64
KNL1-209ENST00000532347 HMX2A2RU54 273 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 CDCP2Q5VXM1 449 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 PRR23CQ6ZRP0 262 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 UBXN4Q92575 508 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 TM9SF2Q99805 663 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 RAXQ9Y2V3 346 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 MYOM3Q5VTT5 1437 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
KNL1-209ENST00000532347 LMTK2Q8IWU2 1503 aa11.05□□□□□ -0.64
KNL1-209ENST00000532347 NME1P15531 152 aaKnown RBP11.05□□□□□ -0.64
KNL1-209ENST00000532347 CDK5R2Q13319 367 aa11.05□□□□□ -0.64
KNL1-209ENST00000532347 XAGE3Q8WTP9 111 aa11.05□□□□□ -0.64
KNL1-209ENST00000532347 C7orf69Q9H7B7 122 aa11.05□□□□□ -0.64
KNL1-209ENST00000532347 STOML1Q9UBI4 398 aa11.05□□□□□ -0.64
KNL1-209ENST00000532347 TMEM2Q9UHN6 1383 aa11.04□□□□□ -0.64
KNL1-209ENST00000532347 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
KNL1-209ENST00000532347 SMAD7O15105 426 aaKnown RBP11.04□□□□□ -0.64
KNL1-209ENST00000532347 RAG1P15918 1043 aa11.04□□□□□ -0.64
KNL1-209ENST00000532347 PRKAG3Q9UGI9 489 aa11.04□□□□□ -0.64
KNL1-209ENST00000532347 XIRP1Q702N8 1843 aaKnown RBP11.03□□□□□ -0.64
KNL1-209ENST00000532347 PROCP04070 461 aa11.03□□□□□ -0.64
KNL1-209ENST00000532347 ACRP10323 421 aa11.03□□□□□ -0.64
KNL1-209ENST00000532347 GUCY2CP25092 1073 aa11.03□□□□□ -0.64
KNL1-209ENST00000532347 DOC2BQ14184 412 aa11.03□□□□□ -0.64
KNL1-209ENST00000532347 PHACTR4Q8IZ21 702 aa11.03□□□□□ -0.64
KNL1-209ENST00000532347 TAB3Q8N5C8 712 aaPredicted RBP11.03□□□□□ -0.64
KNL1-209ENST00000532347 MFSD2AQ8NA29 543 aa11.03□□□□□ -0.64
KNL1-209ENST00000532347 SLC9A7Q96T83 725 aa11.03□□□□□ -0.64
KNL1-209ENST00000532347 DNAJC2Q99543 621 aaKnown RBP11.03□□□□□ -0.64
KNL1-209ENST00000532347 TNFRSF10CO14798 259 aa11.02□□□□□ -0.65
KNL1-209ENST00000532347 KCNA6P17658 529 aa11.02□□□□□ -0.65
KNL1-209ENST00000532347 POLR2BP30876 1174 aaKnown RBP11.02□□□□□ -0.65
KNL1-209ENST00000532347 RBL2Q08999 1139 aa11.02□□□□□ -0.65
KNL1-209ENST00000532347 INTS3Q68E01 1043 aaKnown RBP11.02□□□□□ -0.65
KNL1-209ENST00000532347 CYB5D2Q8WUJ1 264 aa11.02□□□□□ -0.65
KNL1-209ENST00000532347 KIF2CQ99661 725 aa11.02□□□□□ -0.65
KNL1-209ENST00000532347 SPOCK3Q9BQ16 436 aa11.02□□□□□ -0.65
KNL1-209ENST00000532347 EFCAB6Q5THR3 1501 aa11.02□□□□□ -0.65
KNL1-209ENST00000532347 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
KNL1-209ENST00000532347 TNNI3KQ59H18 835 aa11.01□□□□□ -0.65
KNL1-209ENST00000532347 ANKS3Q6ZW76 656 aa11.01□□□□□ -0.65
KNL1-209ENST00000532347 C19orf47Q8N9M1 422 aaKnown RBP11.01□□□□□ -0.65
KNL1-209ENST00000532347 CCDC74BQ96LY2 380 aa11.01□□□□□ -0.65
KNL1-209ENST00000532347 MIPEPQ99797 713 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms