RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 ARL6IP4Q66PJ3 421 aaKnown RBP13.15□□□□□ -0.3
TRIM3-210ENST00000530724 WWC2Q6AWC2 1192 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 NCAPH2Q6IBW4 605 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
TRIM3-210ENST00000530724 PDXDC2PQ6P474 469 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 KCNV1Q6PIU1 500 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 KDM7AQ6ZMT4 941 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 MB21D1Q8N884 522 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 TRIM58Q8NG06 486 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 KAT2BQ92831 832 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 ANAPC4Q9UJX5 808 aa13.15□□□□□ -0.3
TRIM3-210ENST00000530724 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
TRIM3-210ENST00000530724 ABCB11O95342 1321 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 MEGF6O75095 1541 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 A0A087X0B3 334 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 KCNJ18B7U540 433 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 PRPF3O43395 683 aaKnown RBP13.14□□□□□ -0.31
TRIM3-210ENST00000530724 TCP1P17987 556 aaKnown RBP13.14□□□□□ -0.31
TRIM3-210ENST00000530724 DNM2P50570 870 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 KCNJ12Q14500 433 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 AKNAD1Q5T1N1 836 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 WDR59Q6PJI9 974 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 IRF2BP1Q8IU81 584 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 P3H4Q92791 437 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 JAKMIP2Q96AA8 810 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 CABS1Q96KC9 395 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 SLF1Q9BQI6 1058 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 RNF41Q9H4P4 317 aaPredicted RBP13.14□□□□□ -0.31
TRIM3-210ENST00000530724 MAGEF1Q9HAY2 307 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 TSKSQ9UJT2 592 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 SNX12Q9UMY4 172 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 RIPOR2Q9Y4F9 1068 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 COL18A1P39060 1754 aa13.14□□□□□ -0.31
TRIM3-210ENST00000530724 XDHP47989 1333 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 RREB1Q92766 1687 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 RNF225M0QZC1 329 aaPredicted RBP13.13□□□□□ -0.31
TRIM3-210ENST00000530724 CLGNO14967 610 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 MEFVO15553 781 aaPredicted RBP13.13□□□□□ -0.31
TRIM3-210ENST00000530724 PJA2O43164 708 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
TRIM3-210ENST00000530724 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 ATP1A1P05023 1023 aaKnown RBP13.13□□□□□ -0.31
TRIM3-210ENST00000530724 PDE6AP16499 860 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 ADORA1P30542 326 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 VAV2P52735 878 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 SMTNP53814 917 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 ZBED6P86452 979 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRIM3-210ENST00000530724 SCARF1Q14162 830 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 PTPN21Q16825 1174 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 CREG2Q8IUH2 290 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 ZSCAN29Q8IWY8 852 aaPredicted RBP13.13□□□□□ -0.31
TRIM3-210ENST00000530724 IQCKQ8N0W5 287 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 ADSSL1Q8N142 457 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 NUP88Q99567 741 aaPredicted RBP13.13□□□□□ -0.31
TRIM3-210ENST00000530724 EDEM3Q9BZQ6 932 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 CXorf56Q9H5V9 222 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 AKAP11Q9UKA4 1901 aa13.13□□□□□ -0.31
TRIM3-210ENST00000530724 TTC26A0AVF1 554 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 B4E1Z4 1266 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
TRIM3-210ENST00000530724 CHUKO15111 745 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 ABL1P00519 1130 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 CCDC172P0C7W6 258 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 GPTP24298 496 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 MAP2K2P36507 400 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 LONP1P36776 959 aaKnown RBP13.12□□□□□ -0.31
TRIM3-210ENST00000530724 CCT5P48643 541 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 AKAP17AQ02040 695 aaKnown RBP13.12□□□□□ -0.31
TRIM3-210ENST00000530724 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
TRIM3-210ENST00000530724 WLSQ5T9L3 541 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 NFXL1Q6ZNB6 911 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 CCDC50Q8IVM0 306 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 GRAMD1CQ8IYS0 662 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 BCAS4Q8TDM0 211 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 SYMPKQ92797 1274 aaKnown RBP13.12□□□□□ -0.31
TRIM3-210ENST00000530724 DRC1Q96MC2 740 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 ACTR5Q9H9F9 607 aaPredicted RBP13.12□□□□□ -0.31
TRIM3-210ENST00000530724 SENP2Q9HC62 589 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 AXIN2Q9Y2T1 843 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
TRIM3-210ENST00000530724 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 PHACTR2O75167 634 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 FGRP09769 529 aa13.11□□□□□ -0.31
TRIM3-210ENST00000530724 KRT2P35908 639 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms