RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-218ENST00000530442 TLR2O60603 784 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 SNHG28P0DPA3 235 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 HSPA8P11142 646 aaKnown RBP12.88□□□□□ -0.35
CAPN1-218ENST00000530442 PDHBP11177 359 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 CASTP20810 708 aaKnown RBP12.88□□□□□ -0.35
CAPN1-218ENST00000530442 OSBPP22059 807 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 HERVK_113P62684 666 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
CAPN1-218ENST00000530442 SART3Q15020 963 aaKnown RBP12.88□□□□□ -0.35
CAPN1-218ENST00000530442 TMEM67Q5HYA8 995 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 POTEEQ6S8J3 1075 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 DHX32Q7L7V1 743 aaKnown RBP12.88□□□□□ -0.35
CAPN1-218ENST00000530442 IL17RAQ96F46 866 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
CAPN1-218ENST00000530442 CASP8AP2Q9UKL3 1982 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 FLOT1O75955 427 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 HMGB1P09429 215 aaKnown RBP12.87□□□□□ -0.35
CAPN1-218ENST00000530442 BMP3P12645 472 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 SLC1A4P43007 532 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 ANAPC15P60006 121 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-218ENST00000530442 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 P2RX7Q99572 595 aaKnown RBP12.87□□□□□ -0.35
CAPN1-218ENST00000530442 FBXO28Q9NVF7 368 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 CPA4Q9UI42 421 aa12.87□□□□□ -0.35
CAPN1-218ENST00000530442 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-218ENST00000530442 MYH6P13533 1939 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 PEX10O60683 326 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 BCRP11274 1271 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 PSMA5P28066 241 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 DSG3P32926 999 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 LIFRP42702 1097 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 KCTD1Q719H9 257 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 BACH2Q9BYV9 841 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 UPF3BQ9BZI7 483 aaKnown RBP12.86□□□□□ -0.35
CAPN1-218ENST00000530442 TM6SF1Q9BZW5 370 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 ZSWIM6Q9HCJ5 1215 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 TXNRD2Q9NNW7 524 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 PPP1R9AQ9ULJ8 1098 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 MYPNQ86TC9 1320 aa12.86□□□□□ -0.35
CAPN1-218ENST00000530442 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 HTTP42858 3142 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 GPR25O00155 361 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 CNMDO75829 334 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 STAT2P52630 851 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 ZNF543Q08ER8 600 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 TROAPQ12815 778 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 COG2Q14746 738 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
CAPN1-218ENST00000530442 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 SGMS1Q86VZ5 419 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 ZNF654Q8IZM8 581 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 ANKRD13CQ8N6S4 541 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 GTF3C2Q8WUA4 911 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-218ENST00000530442 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 MYL10Q9BUA6 226 aa12.85□□□□□ -0.35
CAPN1-218ENST00000530442 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
CAPN1-218ENST00000530442 RBBP6Q7Z6E9 1792 aaKnown RBP12.84□□□□□ -0.35
CAPN1-218ENST00000530442 GOLGA8HP0CJ92 632 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-218ENST00000530442 CTCFP49711 727 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-218ENST00000530442 RBM25P49756 843 aaKnown RBP12.84□□□□□ -0.35
CAPN1-218ENST00000530442 CAP1Q01518 475 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 FAM110CQ1W6H9 321 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 TTBK2Q6IQ55 1244 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-218ENST00000530442 Q6ZUG5 572 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 REPS2Q8NFH8 660 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 ZNF296Q8WUU4 475 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-218ENST00000530442 AGXT2Q9BYV1 514 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 C22orf23Q9BZE7 217 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 BTBD7Q9P203 1132 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 RBPJLQ9UBG7 517 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 MORF4L1Q9UBU8 362 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 FEM1BQ9UK73 627 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 ADAMTS5Q9UNA0 930 aa12.84□□□□□ -0.35
CAPN1-218ENST00000530442 CCDC69A6NI79 296 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 VWA5AO00534 786 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 PLA2G6O60733 806 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 DDAH1O94760 285 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 RXRAP19793 462 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 LBX1P52954 281 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 ERVK-9P63128 1117 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 ERVK-24P63145 666 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-218ENST00000530442 GRM4Q14833 912 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 ASPRV1Q53RT3 343 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 GPATCH4Q5T3I0 446 aaKnown RBP12.83□□□□□ -0.36
CAPN1-218ENST00000530442 BTNL9Q6UXG8 535 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 NFXL1Q6ZNB6 911 aa12.83□□□□□ -0.36
CAPN1-218ENST00000530442 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms