RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SPATA32Q96LK8 384 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 TM9SF2Q99805 663 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
USP47-209ENST00000530041 USHBP1Q8N6Y0 703 aa7.78□□□□□ -1.16
USP47-209ENST00000530041 PRDM14Q9GZV8 571 aa7.78□□□□□ -1.16
USP47-209ENST00000530041 MKRN2Q9H000 416 aaKnown RBP7.78□□□□□ -1.16
USP47-209ENST00000530041 PPT2Q9UMR5 302 aa7.78□□□□□ -1.16
USP47-209ENST00000530041 ZNF281Q9Y2X9 895 aa7.78□□□□□ -1.16
USP47-209ENST00000530041 SIGLEC6O43699 453 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 C8AP07357 584 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 MLANAQ16655 118 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 C9orf131Q5VYM1 1079 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 FBXW10Q5XX13 1052 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 MPZL3Q6UWV2 235 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 OXR1Q8N573 874 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 TCTN2Q96GX1 697 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 SP110Q9HB58 689 aa7.77□□□□□ -1.17
USP47-209ENST00000530041 SUCOQ9UBS9 1254 aaKnown RBP7.77□□□□□ -1.17
USP47-209ENST00000530041 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.77□□□□□ -1.17
USP47-209ENST00000530041 FITM1A5D6W6 292 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 PRAMEF1O95521 474 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 SOX9P48436 509 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 DUSP4Q13115 394 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 ZNF648Q5T619 568 aaPredicted RBP7.76□□□□□ -1.17
USP47-209ENST00000530041 LCE3BQ5TA77 95 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 LILRA2Q8N149 483 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 LINC00116Q8NCU8 138 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 RASGRP4Q8TDF6 673 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 GPRASP2Q96D09 838 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 GINM1Q9NU53 330 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 CCDC9Q9Y3X0 531 aaKnown RBP7.76□□□□□ -1.17
USP47-209ENST00000530041 PCDHB12Q9Y5F1 795 aa7.76□□□□□ -1.17
USP47-209ENST00000530041 FAM86C2PA6NEL3 165 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 PCBP3P57721 371 aaKnown RBP7.75□□□□□ -1.17
USP47-209ENST00000530041 MESP2Q0VG99 397 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 AUHQ13825 339 aaKnown RBP7.75□□□□□ -1.17
USP47-209ENST00000530041 NR0B2Q15466 257 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 SPPL2CQ8IUH8 684 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 LINC01599Q8WXQ3 324 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 FOXP3Q9BZS1 431 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 CHST7Q9NS84 486 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 PRR13Q9NZ81 148 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 EBF1Q9UH73 591 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 TCFL5Q9UL49 500 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 EFR3BQ9Y2G0 817 aa7.75□□□□□ -1.17
USP47-209ENST00000530041 SSU72P8A0A1W2PR75 194 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 GUCY2CP25092 1073 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 TRHRP34981 398 aaPredicted RBP7.74□□□□□ -1.17
USP47-209ENST00000530041 GJA8P48165 433 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 PMS1P54277 932 aaKnown RBP7.74□□□□□ -1.17
USP47-209ENST00000530041 CHRNEQ04844 493 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 PRR23BQ6ZRT6 265 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 LSRQ86X29 649 aaPredicted RBP7.74□□□□□ -1.17
USP47-209ENST00000530041 ANKS4BQ8N8V4 417 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 SMARCC1Q92922 1105 aaPredicted RBP7.74□□□□□ -1.17
USP47-209ENST00000530041 FAM84AQ96KN4 292 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 G6PC3Q9BUM1 346 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 FBXL21Q9UKT6 434 aa7.74□□□□□ -1.17
USP47-209ENST00000530041 C9IYK1 514 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 RPL10P27635 214 aaKnown RBP7.73□□□□□ -1.17
USP47-209ENST00000530041 UNC5AQ6ZN44 842 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 CCDC81Q6ZN84 652 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 RUFY4Q6ZNE9 571 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 KRTAP1-3Q8IUG1 177 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 KSR1Q8IVT5 923 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 CCDC144CPQ8IYA2 1237 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 C7orf61Q8IZ16 206 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 CRBNQ96SW2 442 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 TGIF2Q9GZN2 237 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 C19orf44Q9H6X5 657 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 GFOD1Q9NXC2 390 aa7.73□□□□□ -1.17
USP47-209ENST00000530041 TMEM82A0PJX8 343 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 SYPP08247 313 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 ZYXQ15942 572 aaKnown RBP7.72□□□□□ -1.17
USP47-209ENST00000530041 BBS9Q3SYG4 887 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 TIGD5Q53EQ6 642 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 WAPLQ7Z5K2 1190 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 SLC38A3Q99624 504 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 RNF32Q9H0A6 362 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 ZMYM5Q9UJ78 669 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 MINPP1Q9UNW1 487 aa7.72□□□□□ -1.17
USP47-209ENST00000530041 SHOXO15266 292 aa7.71□□□□□ -1.18
USP47-209ENST00000530041 EIF6P56537 245 aaKnown RBP7.71□□□□□ -1.18
USP47-209ENST00000530041 ANKRD39Q53RE8 183 aa7.71□□□□□ -1.18
USP47-209ENST00000530041 PPFIBP1Q86W92 1011 aa7.71□□□□□ -1.18
USP47-209ENST00000530041 BHLHE22Q8NFJ8 381 aaPredicted RBP7.71□□□□□ -1.18
USP47-209ENST00000530041 NSUN3Q9H649 340 aaKnown RBP7.71□□□□□ -1.18
USP47-209ENST00000530041 CWC22Q9HCG8 908 aaKnown RBP7.71□□□□□ -1.18
USP47-209ENST00000530041 MEIS1O00470 390 aa7.7□□□□□ -1.18
USP47-209ENST00000530041 BMP8BP34820 402 aa7.7□□□□□ -1.18
USP47-209ENST00000530041 CTSKP43235 329 aa7.7□□□□□ -1.18
USP47-209ENST00000530041 KIR2DL1P43626 348 aaPredicted RBP7.7□□□□□ -1.18
USP47-209ENST00000530041 KIR2DL2P43627 348 aaPredicted RBP7.7□□□□□ -1.18
USP47-209ENST00000530041 GIPRP48546 466 aa7.7□□□□□ -1.18
USP47-209ENST00000530041 SNX17Q15036 470 aa7.7□□□□□ -1.18
USP47-209ENST00000530041 PKN1Q16512 942 aa7.7□□□□□ -1.18
USP47-209ENST00000530041 TDRD10Q5VZ19 366 aaKnown RBP7.7□□□□□ -1.18
USP47-209ENST00000530041 OR6P1Q8NGX9 317 aa7.7□□□□□ -1.18
USP47-209ENST00000530041 MAP6Q96JE9 813 aa7.7□□□□□ -1.18
USP47-209ENST00000530041 DIRC2Q96SL1 478 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms