RNA–Protein interactions for RNA: ENST00000529871.1

CASP1-211, Transcript of caspase 1, humanhuman

TSL 1 (best)

Gene CASP1, Length 1,392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-211ENST00000529871 KIAA1683Q9H0B3 1180 aa10.3□□□□□ -0.76
CASP1-211ENST00000529871 ISY1Q9ULR0 285 aaKnown RBP10.3□□□□□ -0.76
CASP1-211ENST00000529871 COL6A3P12111 3177 aa10.3□□□□□ -0.76
CASP1-211ENST00000529871 ITGBL1O95965 494 aaPredicted RBP10.29□□□□□ -0.76
CASP1-211ENST00000529871 FDX1P10109 184 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 BMP3P12645 472 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 GUCY1A2P33402 732 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 BACE1P56817 501 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 PABPC4Q13310 644 aaKnown RBP eCLIP10.29□□□□□ -0.76
CASP1-211ENST00000529871 CCDC96Q2M329 555 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 LDLRAD1Q5T700 205 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 FASTKD5Q7L8L6 764 aaKnown RBP10.29□□□□□ -0.76
CASP1-211ENST00000529871 FAM160B2Q86V87 743 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 CCDC83Q8IWF9 413 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 FAM177A1Q8N128 213 aaPredicted RBP10.29□□□□□ -0.76
CASP1-211ENST00000529871 RGS22Q8NE09 1264 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
CASP1-211ENST00000529871 VCPKMTQ9H867 229 aa10.29□□□□□ -0.76
CASP1-211ENST00000529871 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
CASP1-211ENST00000529871 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
CASP1-211ENST00000529871 DDX60LQ5H9U9 1706 aaKnown RBP10.29□□□□□ -0.76
CASP1-211ENST00000529871 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
CASP1-211ENST00000529871 SPDYE5A6NIY4 337 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 KLRF2D3W0D1 207 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 UBE2Q2LH0YL09 131 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 TRAF5O00463 557 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 WDR46O15213 610 aaKnown RBP10.28□□□□□ -0.76
CASP1-211ENST00000529871 PLA2G6O60733 806 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 IFNAR1P17181 557 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 FXR1P51114 621 aaKnown RBP eCLIP10.28□□□□□ -0.76
CASP1-211ENST00000529871 SCRN1Q12765 414 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 SPP2Q13103 211 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 IKQ13123 557 aaPredicted RBP10.28□□□□□ -0.76
CASP1-211ENST00000529871 PPIL2Q13356 520 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 TRIM29Q14134 588 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 VGLL4Q14135 290 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 RRP1BQ14684 758 aaKnown RBP10.28□□□□□ -0.76
CASP1-211ENST00000529871 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.28□□□□□ -0.76
CASP1-211ENST00000529871 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
CASP1-211ENST00000529871 NECAB1Q8N987 351 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 RRP36Q96EU6 259 aaKnown RBP10.28□□□□□ -0.76
CASP1-211ENST00000529871 GPHNQ9NQX3 736 aaPredicted RBP10.28□□□□□ -0.76
CASP1-211ENST00000529871 FEM1BQ9UK73 627 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 NID2Q14112 1375 aa10.28□□□□□ -0.76
CASP1-211ENST00000529871 PRPF3O43395 683 aaKnown RBP10.27□□□□□ -0.76
CASP1-211ENST00000529871 CD2BP2O95400 341 aaKnown RBP10.27□□□□□ -0.76
CASP1-211ENST00000529871 DEXIO95424 95 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 SNHG28P0DPA3 235 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 PDHBP11177 359 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 ADD1P35611 737 aaKnown RBP10.27□□□□□ -0.76
CASP1-211ENST00000529871 GTF2A2P52657 109 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 NUCB2P80303 420 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 ZNF543Q08ER8 600 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 SNAPC2Q13487 334 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 DEFB115Q30KQ5 88 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 CCDC144CPQ8IYA2 1237 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 CCDC12Q8WUD4 166 aaPredicted RBP10.27□□□□□ -0.76
CASP1-211ENST00000529871 CCDC102AQ96A19 550 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 SPZ1Q9BXG8 430 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 RNF26Q9BY78 433 aaPredicted RBP10.27□□□□□ -0.76
CASP1-211ENST00000529871 ELP3Q9H9T3 547 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 HOXC10Q9NYD6 342 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.76
CASP1-211ENST00000529871 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 MTMR7Q9Y216 660 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 AFG3L2Q9Y4W6 797 aa10.27□□□□□ -0.76
CASP1-211ENST00000529871 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.77
CASP1-211ENST00000529871 H3BQV1 296 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 hCG_1984214I3L0E3 225 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 NDUFB10O96000 172 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 ZBTB48P10074 688 aaPredicted RBP10.26□□□□□ -0.77
CASP1-211ENST00000529871 CETPP11597 493 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 STAT2P52630 851 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 SOX10P56693 466 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 INHBEP58166 350 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
CASP1-211ENST00000529871 SH3D19Q5HYK7 790 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 LARP1BQ659C4 914 aaKnown RBP10.26□□□□□ -0.77
CASP1-211ENST00000529871 TMTC3Q6ZXV5 915 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 SIAH1Q8IUQ4 282 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 ZNF713Q8N859 430 aaPredicted RBP10.26□□□□□ -0.77
CASP1-211ENST00000529871 PROCA1Q8NCQ7 364 aaPredicted RBP10.26□□□□□ -0.77
CASP1-211ENST00000529871 ACER1Q8TDN7 264 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 C12orf42Q96LP6 360 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 MYL10Q9BUA6 226 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 SENP2Q9HC62 589 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 ORC3Q9UBD5 711 aaPredicted RBP10.26□□□□□ -0.77
CASP1-211ENST00000529871 SNCAIPQ9Y6H5 919 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 STK36Q9NRP7 1315 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 TRIM75PA6NK02 468 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 USP17L15C9J2P7 530 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 USP17L13C9JLJ4 530 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 TMEM232C9JQI7 657 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 USP17L11C9JVI0 530 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 USP17L18D6R9N7 530 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 USP17L22D6RA61 530 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 USP17L17D6RBQ6 530 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 USP17L19D6RCP7 530 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 USP17L20D6RJB6 530 aa10.26□□□□□ -0.77
CASP1-211ENST00000529871 FMNL1O95466 1100 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms