RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ATG4CQ96DT6 458 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 TINF2Q9BSI4 451 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
COPB1-207ENST00000529866 DIS3Q9Y2L1 958 aaKnown RBP12.65□□□□□ -0.38
COPB1-207ENST00000529866 SURF6O75683 361 aaKnown RBP12.64□□□□□ -0.39
COPB1-207ENST00000529866 ICA1Q05084 483 aa12.64□□□□□ -0.39
COPB1-207ENST00000529866 FAAP100Q0VG06 881 aa12.64□□□□□ -0.39
COPB1-207ENST00000529866 PSRC1Q6PGN9 363 aaPredicted RBP12.64□□□□□ -0.39
COPB1-207ENST00000529866 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
COPB1-207ENST00000529866 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.64□□□□□ -0.399e-6■□□□□ 9.3
COPB1-207ENST00000529866 PBX4Q9BYU1 374 aa12.64□□□□□ -0.39
COPB1-207ENST00000529866 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
COPB1-207ENST00000529866 MCM9Q9NXL9 1143 aa12.64□□□□□ -0.39
COPB1-207ENST00000529866 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
COPB1-207ENST00000529866 ADAMTS4O75173 837 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 ACLYP53396 1101 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 POLA2Q14181 598 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 RAB30Q15771 203 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 MFSD5Q6N075 450 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 SPICE1Q8N0Z3 855 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 TMEM199Q8N511 208 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 MSL3Q8N5Y2 521 aaKnown RBP12.63□□□□□ -0.39
COPB1-207ENST00000529866 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 RIOK1Q9BRS2 568 aaKnown RBP12.63□□□□□ -0.39
COPB1-207ENST00000529866 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
COPB1-207ENST00000529866 MTIF3Q9H2K0 278 aaKnown RBP12.63□□□□□ -0.39
COPB1-207ENST00000529866 PRDM12Q9H4Q4 367 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 SWAP70Q9UH65 585 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 RAPGEFL1Q9UHV5 662 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 MSRAQ9UJ68 235 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 TBX21Q9UL17 535 aa12.63□□□□□ -0.39
COPB1-207ENST00000529866 FOCADQ5VW36 1801 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 APBB1O00213 710 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 PGK2P07205 417 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
COPB1-207ENST00000529866 TRIM27P14373 513 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 IGFBP4P22692 258 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 TMEM132BQ14DG7 1078 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 RIOX2Q8IUF8 465 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 SSH3Q8TE77 659 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 TLR7Q9NYK1 1049 aaKnown RBP12.62□□□□□ -0.39
COPB1-207ENST00000529866 FAM184BQ9ULE4 1060 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 TMX2Q9Y320 296 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 ELP1O95163 1332 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 SYNRGQ9UMZ2 1314 aa12.62□□□□□ -0.39
COPB1-207ENST00000529866 BCAR3O75815 825 aa12.61□□□□□ -0.39
COPB1-207ENST00000529866 TAL1P17542 331 aaPredicted RBP12.61□□□□□ -0.39
COPB1-207ENST00000529866 STAT3P40763 770 aa12.61□□□□□ -0.39
COPB1-207ENST00000529866 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
COPB1-207ENST00000529866 ZNF792Q3KQV3 632 aa12.61□□□□□ -0.39
COPB1-207ENST00000529866 TMEM240Q5SV17 173 aa12.61□□□□□ -0.39
COPB1-207ENST00000529866 PCSK9Q8NBP7 692 aaKnown RBP12.61□□□□□ -0.39
COPB1-207ENST00000529866 FRAT1Q92837 279 aaPredicted RBP12.61□□□□□ -0.39
COPB1-207ENST00000529866 LENG1Q96BZ8 264 aaPredicted RBP12.61□□□□□ -0.39
COPB1-207ENST00000529866 C1QTNF1Q9BXJ1 281 aa12.61□□□□□ -0.39
COPB1-207ENST00000529866 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
COPB1-207ENST00000529866 ZHX1Q9UKY1 873 aaPredicted RBP12.61□□□□□ -0.39
COPB1-207ENST00000529866 PIEZO1Q92508 2521 aa12.61□□□□□ -0.39
COPB1-207ENST00000529866 SYNGAP1Q96PV0 1343 aa12.61□□□□□ -0.39
COPB1-207ENST00000529866 TLR3O15455 904 aaKnown RBP12.6□□□□□ -0.39
COPB1-207ENST00000529866 CST5P28325 142 aaPredicted RBP12.6□□□□□ -0.39
COPB1-207ENST00000529866 PBX2P40425 430 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 ATP8B2P98198 1209 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 KCNA10Q16322 511 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 KIAA1755Q5JYT7 1200 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 RASIP1Q5U651 963 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 MIER1Q8N108 512 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 KLHDC9Q8NEP7 349 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 CLUAP1Q96AJ1 413 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 VTI1AQ96AJ9 217 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 CCDC17Q96LX7 622 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 ANTXR1Q9H6X2 564 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 SLC28A3Q9HAS3 691 aa12.6□□□□□ -0.39
COPB1-207ENST00000529866 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
COPB1-207ENST00000529866 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 A0A0U1RQG5 324 aaPredicted RBP12.59□□□□□ -0.39
COPB1-207ENST00000529866 GRXCR1A8MXD5 290 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 VWA5AO00534 786 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 DUSP11O75319 330 aaKnown RBP12.59□□□□□ -0.39
COPB1-207ENST00000529866 AKR1B1P15121 316 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 CSF2RAP15509 400 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 CCDC85BQ15834 202 aaPredicted RBP12.59□□□□□ -0.39
COPB1-207ENST00000529866 AAK1Q2M2I8 961 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
COPB1-207ENST00000529866 GOPCQ9HD26 462 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 DCP1AQ9NPI6 582 aaPredicted RBP12.59□□□□□ -0.39
COPB1-207ENST00000529866 PPP1R9AQ9ULJ8 1098 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 ADAMTS5Q9UNA0 930 aa12.59□□□□□ -0.39
COPB1-207ENST00000529866 ARVCFO00192 962 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 C6orf222P0C671 652 aaPredicted RBP12.58□□□□□ -0.4
COPB1-207ENST00000529866 PDE6AP16499 860 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 ADGRE1Q14246 886 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 CCSAPQ6IQ19 270 aaPredicted RBP12.58□□□□□ -0.4
COPB1-207ENST00000529866 ZNF365Q70YC5 407 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms