RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 LRRN4CLQ8ND94 238 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 APPBP2Q92624 585 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 SGSM3Q96HU1 749 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 SPOCK3Q9BQ16 436 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 METTL22Q9BUU2 404 aaPredicted RBP5.78□□□□□ -1.48
SVIP-203ENST00000529848 DSCC1Q9BVC3 393 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 OSBPL1AQ9BXW6 950 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 SUSD2Q9UGT4 822 aa5.78□□□□□ -1.48
SVIP-203ENST00000529848 CNTNAP4Q9C0A0 1308 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 IGF2BP3O00425 579 aaKnown RBP eCLIP5.77□□□□□ -1.49
SVIP-203ENST00000529848 ENPP3O14638 875 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 CDC45O75419 566 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 F13BP05160 661 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 HSD3B2P26439 372 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 DOC2BQ14184 412 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 C22orf34Q6ZV56 151 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 HOMER1Q86YM7 354 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 DTWD2Q8NBA8 298 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 BVESQ8NE79 360 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 ADCY4Q8NFM4 1077 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 Q96M66 194 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 HEXIM2Q96MH2 286 aaKnown RBP5.77□□□□□ -1.49
SVIP-203ENST00000529848 PRDM14Q9GZV8 571 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 FANCLQ9NW38 375 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 GFOD1Q9NXC2 390 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 PRR13Q9NZ81 148 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 APEX2Q9UBZ4 518 aa5.77□□□□□ -1.49
SVIP-203ENST00000529848 ESYT3A0FGR9 886 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 FAM155AB1AL88 458 aaPredicted RBP5.76□□□□□ -1.49
SVIP-203ENST00000529848 WDR64B1ANS9 1081 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 SHOXO15266 292 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 IGLV1-40P01703 118 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 H2AFB1P0C5Y9 115 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 H2AFB2P0C5Z0 115 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 ZNF865P0CJ78 1059 aaPredicted RBP5.76□□□□□ -1.49
SVIP-203ENST00000529848 SNW1Q13573 536 aaKnown RBP5.76□□□□□ -1.49
SVIP-203ENST00000529848 HSP90AA2PQ14568 343 aaPredicted RBP5.76□□□□□ -1.49
SVIP-203ENST00000529848 CLEC16AQ2KHT3 1053 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 POMZP3Q6PJE2 187 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 FAM214BQ7L5A3 538 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 SHISA5Q8N114 240 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 ZSWIM2Q8NEG5 633 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 SHKBP1Q8TBC3 707 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 PIWIL2Q8TC59 973 aaKnown RBP5.76□□□□□ -1.49
SVIP-203ENST00000529848 BRF1Q92994 677 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 IPO9Q96P70 1041 aaKnown RBP5.76□□□□□ -1.49
SVIP-203ENST00000529848 NOL6Q9H6R4 1146 aaKnown RBP5.76□□□□□ -1.49
SVIP-203ENST00000529848 TMEM260Q9NX78 707 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 AKT3Q9Y243 479 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 PTCH2Q9Y6C5 1203 aa5.76□□□□□ -1.49
SVIP-203ENST00000529848 A0A087WZG4 1122 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 TRAV20A0A0B4J274 112 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 A0A1W2PQU0 124 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 PRR33A8MZF0 331 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 ITGAVP06756 1048 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 FAM153BP0C7A2 387 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 FSTP19883 344 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 ZNF445P59923 1031 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 TNK2Q07912 1038 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 NMIQ13287 307 aaPredicted RBP5.75□□□□□ -1.49
SVIP-203ENST00000529848 SQSTM1Q13501 440 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 PPP2R5DQ14738 602 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 CPSF6Q16630 551 aaKnown RBP eCLIP5.75□□□□□ -1.49
SVIP-203ENST00000529848 LONRF2Q1L5Z9 754 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 ZC3H12BQ5HYM0 836 aaKnown RBP5.75□□□□□ -1.49
SVIP-203ENST00000529848 TMC3Q7Z5M5 1100 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 ZNF227Q86WZ6 799 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 FIBCD1Q8N539 461 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 JMYQ8N9B5 988 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 ZBTB38Q8NAP3 1195 aaPredicted RBP5.75□□□□□ -1.49
SVIP-203ENST00000529848 SYTL5Q8TDW5 730 aaPredicted RBP5.75□□□□□ -1.49
SVIP-203ENST00000529848 RCC1LQ96I51 464 aaKnown RBP5.75□□□□□ -1.49
SVIP-203ENST00000529848 SLC26A8Q96RN1 970 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 CDC6Q99741 560 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 AARSD1Q9BTE6 412 aaKnown RBP5.75□□□□□ -1.49
SVIP-203ENST00000529848 KANSL2Q9H9L4 492 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 LRRC4CQ9HCJ2 640 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 DIS3Q9Y2L1 958 aaKnown RBP5.75□□□□□ -1.49
SVIP-203ENST00000529848 LEMD3Q9Y2U8 911 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 SF3B6Q9Y3B4 125 aaKnown RBP5.75□□□□□ -1.49
SVIP-203ENST00000529848 FHOD1Q9Y613 1164 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 CAPN6Q9Y6Q1 641 aa5.75□□□□□ -1.49
SVIP-203ENST00000529848 MEIS1O00470 390 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 MSTNO14793 375 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 SIGLEC6O43699 453 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 ITIH2P19823 946 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 PPP2R2AP63151 447 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 TMEM67Q5HYA8 995 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 EGFLAMQ63HQ2 1017 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 TRIM59Q8IWR1 403 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 ARHGEF39Q8N4T4 335 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 ZNF513Q8N8E2 541 aaPredicted RBP5.74□□□□□ -1.49
SVIP-203ENST00000529848 ZDHHC15Q96MV8 337 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 SLKQ9H2G2 1235 aaPredicted RBP5.74□□□□□ -1.49
SVIP-203ENST00000529848 TRIT1Q9H3H1 467 aaKnown RBP5.74□□□□□ -1.49
SVIP-203ENST00000529848 MKNK2Q9HBH9 465 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 CHST7Q9NS84 486 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 CGGBP1Q9UFW8 167 aaPredicted RBP5.74□□□□□ -1.49
SVIP-203ENST00000529848 EMC9Q9Y3B6 208 aa5.74□□□□□ -1.49
SVIP-203ENST00000529848 ADCY3O60266 1144 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms