RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 USP17L17D6RBQ6 530 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 USP17L19D6RCP7 530 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 USP17L20D6RJB6 530 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 ZBTB43O43298 467 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 PLA2G6O60733 806 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 PDHBP11177 359 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 TM4SF4P48230 202 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 AK2P54819 239 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 USP17L24Q0WX57 530 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 MOGSQ13724 837 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
C9orf135-207ENST00000529446 BRI3BPQ8WY22 251 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 LZTS2Q9BRK4 669 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 GPHNQ9NQX3 736 aaPredicted RBP13.72□□□□□ -0.21
C9orf135-207ENST00000529446 PNMA3Q9UL41 463 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 THSD7BQ9C0I4 1608 aa13.72□□□□□ -0.21
C9orf135-207ENST00000529446 MYPNQ86TC9 1320 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 RAD21O60216 631 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 ALDH1A1P00352 501 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 PARP1P09874 1014 aaKnown RBP13.71□□□□□ -0.21
C9orf135-207ENST00000529446 VEGFBP49765 207 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 GNAQP50148 359 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 KIF23Q02241 960 aaPredicted RBP13.71□□□□□ -0.21
C9orf135-207ENST00000529446 ZNF543Q08ER8 600 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 APOBRQ0VD83 1088 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 MKRN3Q13064 507 aaKnown RBP13.71□□□□□ -0.21
C9orf135-207ENST00000529446 GRM4Q14833 912 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 FAM160B2Q86V87 743 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 CHURC1Q8WUH1 139 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 RPAP3Q9H6T3 665 aaPredicted RBP13.71□□□□□ -0.21
C9orf135-207ENST00000529446 SENP2Q9HC62 589 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
C9orf135-207ENST00000529446 FEM1BQ9UK73 627 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 BRPF3Q9ULD4 1205 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 LIMCH1Q9UPQ0 1083 aa13.71□□□□□ -0.21
C9orf135-207ENST00000529446 PTPRFP10586 1907 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 PALM3A6NDB9 673 aaPredicted RBP13.7□□□□□ -0.22
C9orf135-207ENST00000529446 GOLGA8BA8MQT2 603 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 FDX1P10109 184 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 OSBPP22059 807 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 STAT2P52630 851 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 GRM1Q13255 1194 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 KIAA1755Q5JYT7 1200 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 FAM83BQ5T0W9 1011 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 CATSPERGQ6ZRH7 1159 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 SPICE1Q8N0Z3 855 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 FANCBQ8NB91 859 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 GTF3C2Q8WUA4 911 aaPredicted RBP13.7□□□□□ -0.22
C9orf135-207ENST00000529446 ZSCAN31Q96LW9 406 aaPredicted RBP13.7□□□□□ -0.22
C9orf135-207ENST00000529446 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
C9orf135-207ENST00000529446 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 BTBD19C9JJ37 291 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 PDIA3P30101 505 aaKnown RBP13.69□□□□□ -0.22
C9orf135-207ENST00000529446 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
C9orf135-207ENST00000529446 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
C9orf135-207ENST00000529446 COG2Q14746 738 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 RTN1Q16799 776 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 TREML2Q5T2D2 321 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 BTNL9Q6UXG8 535 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 IFNL1Q8IU54 200 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 PRPF38AQ8NAV1 312 aaKnown RBP13.69□□□□□ -0.22
C9orf135-207ENST00000529446 NUP133Q8WUM0 1156 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 TANGO6Q9C0B7 1094 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
C9orf135-207ENST00000529446 MAD2L2Q9UI95 211 aa13.69□□□□□ -0.22
C9orf135-207ENST00000529446 NAP1L2Q9ULW6 460 aaPredicted RBP13.69□□□□□ -0.22
C9orf135-207ENST00000529446 TMEM232C9JQI7 657 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 PDHXO00330 501 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
C9orf135-207ENST00000529446 PFKFB2O60825 505 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 FLOT1O75955 427 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 HTRA3P83110 453 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 DGKZQ13574 1117 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 CPLX2Q6PUV4 134 aaKnown RBP13.68□□□□□ -0.22
C9orf135-207ENST00000529446 LBX2Q6XYB7 198 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 KCTD1Q719H9 257 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 SNX21Q969T3 373 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 PARK7Q99497 189 aaKnown RBP13.68□□□□□ -0.22
C9orf135-207ENST00000529446 PTPN18Q99952 460 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 SLF1Q9BQI6 1058 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 TPCN1Q9ULQ1 816 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 ISY1Q9ULR0 285 aaKnown RBP13.68□□□□□ -0.22
C9orf135-207ENST00000529446 HPS5Q9UPZ3 1129 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
C9orf135-207ENST00000529446 IGF2BP3O00425 579 aaKnown RBP eCLIP13.67□□□□□ -0.22
C9orf135-207ENST00000529446 AOC2O75106 756 aa13.67□□□□□ -0.22
C9orf135-207ENST00000529446 DSG3P32926 999 aa13.67□□□□□ -0.22
C9orf135-207ENST00000529446 IKQ13123 557 aaPredicted RBP13.67□□□□□ -0.22
C9orf135-207ENST00000529446 FAM43AQ8N2R8 423 aa13.67□□□□□ -0.22
C9orf135-207ENST00000529446 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
C9orf135-207ENST00000529446 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
C9orf135-207ENST00000529446 MYL10Q9BUA6 226 aa13.67□□□□□ -0.22
C9orf135-207ENST00000529446 SPZ1Q9BXG8 430 aa13.67□□□□□ -0.22
C9orf135-207ENST00000529446 ASCC2Q9H1I8 757 aaPredicted RBP13.67□□□□□ -0.22
C9orf135-207ENST00000529446 SLKQ9H2G2 1235 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms