RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
LINC01001-201ENST00000526704 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
LINC01001-201ENST00000526704 IQUBQ8NA54 791 aa13.2□□□□□ -0.3
LINC01001-201ENST00000526704 CCDC51Q96ER9 411 aa13.2□□□□□ -0.3
LINC01001-201ENST00000526704 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
LINC01001-201ENST00000526704 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
LINC01001-201ENST00000526704 GTF2E1P29083 439 aaPredicted RBP13.2□□□□□ -0.3
LINC01001-201ENST00000526704 TRAPPC10P48553 1259 aa13.2□□□□□ -0.3
LINC01001-201ENST00000526704 MECOMQ03112 1051 aa13.2□□□□□ -0.3
LINC01001-201ENST00000526704 PFKFB3Q16875 520 aaPredicted RBP13.2□□□□□ -0.3
LINC01001-201ENST00000526704 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
LINC01001-201ENST00000526704 DCP1AQ9NPI6 582 aaPredicted RBP13.2□□□□□ -0.3
LINC01001-201ENST00000526704 RWDD2AQ9UIY3 292 aa13.2□□□□□ -0.3
LINC01001-201ENST00000526704 AHDC1Q5TGY3 1603 aaPredicted RBP13.19□□□□□ -0.3
LINC01001-201ENST00000526704 CYP2D6P10635 497 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 MCM7P33993 719 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 NLRP5P59047 1200 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 ERVK-24P63145 666 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 DDB1Q16531 1140 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 FBXO33Q7Z6M2 555 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 MARCH10Q8NA82 808 aaPredicted RBP13.19□□□□□ -0.3
LINC01001-201ENST00000526704 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 CELF1Q92879 486 aaKnown RBP13.19□□□□□ -0.3
LINC01001-201ENST00000526704 KIF5CO60282 957 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 TXLNAP40222 546 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 COPB1P53618 953 aaKnown RBP13.19□□□□□ -0.3
LINC01001-201ENST00000526704 PAK1Q13153 545 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 SRGAP1Q7Z6B7 1085 aa13.19□□□□□ -0.3
LINC01001-201ENST00000526704 SPATA31A1Q5TZJ5 1347 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 FAM205AQ6ZU69 1335 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 RNF225M0QZC1 329 aaPredicted RBP13.18□□□□□ -0.3
LINC01001-201ENST00000526704 CDC25AP30304 524 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 CYP2C19P33261 490 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 CHMP4BP1P59074 171 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 RCSD1Q6JBY9 416 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 C4orf32Q8N8J7 132 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 NELFBQ8WX92 580 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
LINC01001-201ENST00000526704 CDCA7Q9BWT1 371 aaPredicted RBP13.18□□□□□ -0.3
LINC01001-201ENST00000526704 ABHD10Q9NUJ1 306 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 ERICH4A6NGS2 130 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 LRRC10BA6NIK2 292 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 N4BP3O15049 544 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 ZNF569Q5MCW4 686 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 ZNF658Q5TYW1 1059 aaPredicted RBP13.18□□□□□ -0.3
LINC01001-201ENST00000526704 CRNKL1Q9BZJ0 848 aaKnown RBP13.18□□□□□ -0.3
LINC01001-201ENST00000526704 VPS16Q9H269 839 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 ZSWIM4Q9H7M6 989 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 ARFGAP3Q9NP61 516 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 TAB2Q9NYJ8 693 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 CDC23Q9UJX2 597 aa13.18□□□□□ -0.3
LINC01001-201ENST00000526704 TTF2Q9UNY4 1162 aaKnown RBP13.18□□□□□ -0.3
LINC01001-201ENST00000526704 PDS5AQ29RF7 1337 aaKnown RBP13.17□□□□□ -0.3
LINC01001-201ENST00000526704 KCNJ18B7U540 433 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 RPN1P04843 607 aaKnown RBP13.17□□□□□ -0.3
LINC01001-201ENST00000526704 PDE4CQ08493 712 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 KCNJ12Q14500 433 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 CLEC4GQ6UXB4 293 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 FUT8Q9BYC5 575 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
LINC01001-201ENST00000526704 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 ADAMTS2O95450 1211 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 ABL1P00519 1130 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 OAS2P29728 719 aaKnown RBP13.17□□□□□ -0.3
LINC01001-201ENST00000526704 SPAG1Q07617 926 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 ARL6IP4Q66PJ3 421 aaKnown RBP13.17□□□□□ -0.3
LINC01001-201ENST00000526704 TMTC1Q8IUR5 882 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 SLC35F6Q8N357 371 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
LINC01001-201ENST00000526704 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.17□□□□□ -0.3
LINC01001-201ENST00000526704 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
LINC01001-201ENST00000526704 CCDC151A5D8V7 595 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 POLR3GO15318 223 aaPredicted RBP13.16□□□□□ -0.3
LINC01001-201ENST00000526704 PRDX5P30044 214 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 LONP1P36776 959 aaKnown RBP13.16□□□□□ -0.3
LINC01001-201ENST00000526704 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 GPKOWQ92917 476 aaPredicted RBP eCLIP13.16□□□□□ -0.3
LINC01001-201ENST00000526704 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 PRCPP42785 496 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 TRIM14Q14142 442 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 BLIDQ8IZY5 108 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 CEP112Q8N8E3 955 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
LINC01001-201ENST00000526704 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 CTAGE9A4FU28 777 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 TSPY2A6NKD2 308 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 TFRCP02786 760 aaKnown RBP13.15□□□□□ -0.3
LINC01001-201ENST00000526704 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
LINC01001-201ENST00000526704 BRD3Q15059 726 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 LONRF2Q1L5Z9 754 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 CYP26C1Q6V0L0 522 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 RASGRP4Q8TDF6 673 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
LINC01001-201ENST00000526704 DISC1Q9NRI5 854 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 TFCP2L1Q9NZI6 479 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 MAPK8IP1Q9UQF2 711 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms