RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 HOXC10Q9NYD6 342 aa15.18■□□□□ 0.02
SMPD1-202ENST00000526280 SPDYE16A6NNV3 312 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-202ENST00000526280 PRC1O43663 620 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 FKTNO75072 461 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 FLOT1O75955 427 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 BMP3P12645 472 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 SLC1A4P43007 532 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 SP3Q02447 781 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 IFIT1BQ5T764 474 aaKnown RBP15.17■□□□□ 0.02
SMPD1-202ENST00000526280 POTEEQ6S8J3 1075 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 LBX2Q6XYB7 198 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 GTF3C2Q8WUA4 911 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-202ENST00000526280 KAT14Q9H8E8 782 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 RLFQ13129 1914 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 MYPNQ86TC9 1320 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 ERICH2A1L162 156 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 HMGB1P09429 215 aaKnown RBP15.17■□□□□ 0.02
SMPD1-202ENST00000526280 DSG3P32926 999 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 EXOSC10Q01780 885 aaKnown RBP15.17■□□□□ 0.02
SMPD1-202ENST00000526280 TMEM67Q5HYA8 995 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 DHX32Q7L7V1 743 aaKnown RBP15.17■□□□□ 0.02
SMPD1-202ENST00000526280 ANKRD13CQ8N6S4 541 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 PNMA1Q8ND90 353 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 DCAF4Q8WV16 495 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 TMEM87BQ96K49 555 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 FBXO28Q9NVF7 368 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 RBPJLQ9UBG7 517 aa15.17■□□□□ 0.02
SMPD1-202ENST00000526280 CASP8AP2Q9UKL3 1982 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 WDR19Q8NEZ3 1342 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 SNHG28P0DPA3 235 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 PDHBP11177 359 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 WTAPQ15007 396 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 FAM110CQ1W6H9 321 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 RASGRP2Q7LDG7 609 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 JAKMIP1Q96N16 626 aaKnown RBP15.16■□□□□ 0.02
SMPD1-202ENST00000526280 LY9Q9HBG7 655 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 SENP2Q9HC62 589 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 TXNRD2Q9NNW7 524 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 MORF4L1Q9UBU8 362 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 FEM1BQ9UK73 627 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 PPP1R9AQ9ULJ8 1098 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 ADAMTS5Q9UNA0 930 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 MTMR7Q9Y216 660 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 RABGAP1Q9Y3P9 1069 aa15.16■□□□□ 0.02
SMPD1-202ENST00000526280 PARP14Q460N5 1801 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 TMEM232C9JQI7 657 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 SH2B2O14492 632 aaPredicted RBP15.15■□□□□ 0.02
SMPD1-202ENST00000526280 PLA2G6O60733 806 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 PSMA5P28066 241 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 KCTD1Q719H9 257 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 TMTC2Q8N394 836 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 PRPF38AQ8NAV1 312 aaKnown RBP15.15■□□□□ 0.02
SMPD1-202ENST00000526280 GPRC5AQ8NFJ5 357 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 CHURC1Q8WUH1 139 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 ATG4CQ96DT6 458 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 SLF1Q9BQI6 1058 aa15.15■□□□□ 0.02
SMPD1-202ENST00000526280 GPHNQ9NQX3 736 aaPredicted RBP15.15■□□□□ 0.02
SMPD1-202ENST00000526280 PEX10O60683 326 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 CNMDO75829 334 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 LIFRP42702 1097 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 STAT2P52630 851 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 ANAPC15P60006 121 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 ERVK-9P63128 1117 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 ERVK-24P63145 666 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 LACTBP83111 547 aaPredicted RBP15.14■□□□□ 0.01
SMPD1-202ENST00000526280 ZNF543Q08ER8 600 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 CCDC96Q2M329 555 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 Q3C1V9 767 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 BLOC1S2Q6QNY1 142 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 FAM160B2Q86V87 743 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 MB21D1Q8N884 522 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 ERO1AQ96HE7 468 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 BTBD7Q9P203 1132 aa15.14■□□□□ 0.01
SMPD1-202ENST00000526280 VWA5AO00534 786 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 CPA1P15085 419 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 CASTP20810 708 aaKnown RBP15.13■□□□□ 0.01
SMPD1-202ENST00000526280 CAP1Q01518 475 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 GPATCH4Q5T3I0 446 aaKnown RBP15.13■□□□□ 0.01
SMPD1-202ENST00000526280 TTBK2Q6IQ55 1244 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
SMPD1-202ENST00000526280 BTNL9Q6UXG8 535 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 CD99L2Q8TCZ2 262 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 KIFC2Q96AC6 838 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 TCEANC2Q96MN5 208 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 PAGR1Q9BTK6 254 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 TM6SF1Q9BZW5 370 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 GPCPD1Q9NPB8 672 aa15.13■□□□□ 0.01
SMPD1-202ENST00000526280 ISY1Q9ULR0 285 aaKnown RBP15.13■□□□□ 0.01
SMPD1-202ENST00000526280 FRMPD2Q68DX3 1309 aaPredicted RBP15.12■□□□□ 0.01
SMPD1-202ENST00000526280 RPS6KB1P23443 525 aa15.12■□□□□ 0.01
SMPD1-202ENST00000526280 CTGFP29279 349 aa15.12■□□□□ 0.01
SMPD1-202ENST00000526280 TROAPQ12815 778 aa15.12■□□□□ 0.01
SMPD1-202ENST00000526280 KIF22Q14807 665 aa15.12■□□□□ 0.01
SMPD1-202ENST00000526280 CATIPQ7Z7H3 387 aa15.12■□□□□ 0.01
SMPD1-202ENST00000526280 SGMS1Q86VZ5 419 aa15.12■□□□□ 0.01
SMPD1-202ENST00000526280 REPS2Q8NFH8 660 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms