RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CORINQ9Y5Q5 1042 aa6.73□□□□□ -1.33
CSDE1-211ENST00000525970 GRIN3BO60391 1043 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 ESR1P03372 595 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 TMEM253P0C7T8 217 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 NASPP49321 788 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-211ENST00000525970 CWF19L2Q2TBE0 894 aaKnown RBP6.72□□□□□ -1.33
CSDE1-211ENST00000525970 SLC6A19Q695T7 634 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 XAGE3Q8WTP9 111 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 GINM1Q9NU53 330 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 RAPGEFL1Q9UHV5 662 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 TMEM59LQ9UK28 342 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
CSDE1-211ENST00000525970 ROBO2Q9HCK4 1378 aa6.71□□□□□ -1.33
CSDE1-211ENST00000525970 SBNO2Q9Y2G9 1366 aa6.71□□□□□ -1.33
CSDE1-211ENST00000525970 PPM1GO15355 546 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-211ENST00000525970 KLF4O43474 513 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 HPXP02790 462 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 MED14OSP0DP75 135 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 ZSCAN22P10073 491 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-211ENST00000525970 COL9A2Q14055 689 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-211ENST00000525970 REC114Q7Z4M0 266 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 CDH24Q86UP0 819 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 AMIGO3Q86WK7 504 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 CKAP2LQ8IYA6 745 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 DCP1AQ9NPI6 582 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-211ENST00000525970 UBP1Q9NZI7 540 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 TJP2Q9UDY2 1190 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 EFR3BQ9Y2G0 817 aa6.71□□□□□ -1.34
CSDE1-211ENST00000525970 MCM4P33991 863 aa6.7□□□□□ -1.34
CSDE1-211ENST00000525970 ETFBP38117 255 aa6.7□□□□□ -1.34
CSDE1-211ENST00000525970 APOBRQ0VD83 1088 aa6.7□□□□□ -1.34
CSDE1-211ENST00000525970 BMS1Q14692 1282 aaKnown RBP6.7□□□□□ -1.34
CSDE1-211ENST00000525970 NFE2L2Q16236 605 aa6.7□□□□□ -1.34
CSDE1-211ENST00000525970 SEZ6Q53EL9 994 aa6.7□□□□□ -1.34
CSDE1-211ENST00000525970 MYLIPQ8WY64 445 aa6.7□□□□□ -1.34
CSDE1-211ENST00000525970 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
CSDE1-211ENST00000525970 DPH2Q9BQC3 489 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-211ENST00000525970 TRIT1Q9H3H1 467 aaKnown RBP6.7□□□□□ -1.34
CSDE1-211ENST00000525970 ADAM30Q9UKF2 790 aa6.7□□□□□ -1.34
CSDE1-211ENST00000525970 DNAJC25-GNG10A0A024R161 153 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 KRTAP9-7A8MTY7 169 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 SRFP11831 508 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 GLDCP23378 1020 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 CRKP46108 304 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 TCEAL1Q15170 157 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 RALGPS1Q5JS13 557 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 MCATQ8IVS2 390 aaKnown RBP6.69□□□□□ -1.34
CSDE1-211ENST00000525970 ANKRD13AQ8IZ07 590 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 DNAJB8Q8NHS0 232 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 ACSF2Q96CM8 615 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-211ENST00000525970 SLC26A8Q96RN1 970 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 BRMS1Q9HCU9 246 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 CD320Q9NPF0 282 aa6.69□□□□□ -1.34
CSDE1-211ENST00000525970 POLR3KQ9Y2Y1 108 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-211ENST00000525970 TCAF2A6NFQ2 919 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 NPIPB6E9PJ23 425 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 HTR3BO95264 441 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSDE1-211ENST00000525970 GAB4Q2WGN9 574 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 CREG2Q8IUH2 290 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 SLITRK4Q8IW52 837 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 FAM13CQ8NE31 585 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 NKD1Q969G9 470 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 Q96M66 194 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 GPATCH2Q9NW75 528 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 SIRPGQ9P1W8 387 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 REV1Q9UBZ9 1251 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 KLHL3Q9UH77 587 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 PCDHB14Q9Y5E9 798 aa6.68□□□□□ -1.34
CSDE1-211ENST00000525970 UPK3BL1B0FP48 263 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 UPK3BL2E5RIL1 263 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 HK2P52789 917 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 YARSP54577 528 aaKnown RBP6.67□□□□□ -1.34
CSDE1-211ENST00000525970 RAB33AQ14088 237 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 MLECQ14165 292 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 KCNA10Q16322 511 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 LILRA6Q6PI73 481 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 ATG14Q6ZNE5 492 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 ANKS3Q6ZW76 656 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 LRRC3Q9BY71 257 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 GPR62Q9BZJ7 368 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 DUSP15Q9H1R2 295 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-211ENST00000525970 ADAMTS10Q9H324 1103 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 CEP131Q9UPN4 1083 aa6.67□□□□□ -1.34
CSDE1-211ENST00000525970 MRPL42Q9Y6G3 142 aaKnown RBP6.67□□□□□ -1.34
CSDE1-211ENST00000525970 ENPP3O14638 875 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 HSD3B2P26439 372 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 TPP2P29144 1249 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-211ENST00000525970 ZNF165P49910 485 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 TMEM201Q5SNT2 666 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 CIAPIN1Q6FI81 312 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 GK5Q6ZS86 529 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 TTLL10Q6ZVT0 673 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 LILRA2Q8N149 483 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 PDZD8Q8NEN9 1154 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 MRFAP1L1Q96HT8 127 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 SHDQ96IW2 340 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 KCNH3Q9ULD8 1083 aa6.66□□□□□ -1.34
CSDE1-211ENST00000525970 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms