RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 SV2CQ496J9 727 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 C2orf27AQ580R0 203 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 FOXB2Q5VYV0 432 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 HEATR6Q6AI08 1181 aaKnown RBP6.82□□□□□ -1.32
USP47-206ENST00000525367 PAOXQ6QHF9 649 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 PPP1R14AQ96A00 147 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 Q96M66 194 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 TBC1D32Q96NH3 1257 aa6.82□□□□□ -1.32
USP47-206ENST00000525367 TPX2Q9ULW0 747 aaKnown RBP6.82□□□□□ -1.32
USP47-206ENST00000525367 FAM170BA6NMN3 283 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 DYRK3O43781 588 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 AUHQ13825 339 aaKnown RBP6.81□□□□□ -1.32
USP47-206ENST00000525367 PTPROQ16827 1216 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 TKFCQ3LXA3 575 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 RNF187Q5TA31 235 aaPredicted RBP6.81□□□□□ -1.32
USP47-206ENST00000525367 YOD1Q5VVQ6 348 aaPredicted RBP6.81□□□□□ -1.32
USP47-206ENST00000525367 FAM214BQ7L5A3 538 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 C7orf61Q8IZ16 206 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 ZCRB1Q8TBF4 217 aaKnown RBP6.81□□□□□ -1.32
USP47-206ENST00000525367 RNF141Q8WVD5 230 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 BRF1Q92994 677 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 MFSD14AQ96MC6 490 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 HEXIM2Q96MH2 286 aaKnown RBP6.81□□□□□ -1.32
USP47-206ENST00000525367 FAM83CQ9BQN1 747 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 SPATA9Q9BWV2 254 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 GOLGA2P5Q9HBQ8 144 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
USP47-206ENST00000525367 A0A1W2PQU0 124 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 ANKRD34BA5PLL1 514 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 CDC45O75419 566 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 CBX7O95931 251 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 ITGAVP06756 1048 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 CD247P20963 164 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 HSD3B2P26439 372 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 ETV3P41162 512 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 GRIA2P42262 883 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 ANAPC15P60006 121 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 ZNF765Q7L2R6 523 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 TMC3Q7Z5M5 1100 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 ADAT2Q7Z6V5 191 aaKnown RBP6.8□□□□□ -1.32
USP47-206ENST00000525367 CLEC10AQ8IUN9 316 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 FBXL6Q8N531 539 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 JMYQ8N9B5 988 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 THAP3Q8WTV1 239 aaPredicted RBP6.8□□□□□ -1.32
USP47-206ENST00000525367 SMARCC1Q92922 1105 aaPredicted RBP6.8□□□□□ -1.32
USP47-206ENST00000525367 PRDM14Q9GZV8 571 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 METTL14Q9HCE5 456 aaKnown RBP6.8□□□□□ -1.32
USP47-206ENST00000525367 GP6Q9HCN6 339 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 ARHGEF4Q9NR80 690 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 TMEM260Q9NX78 707 aa6.8□□□□□ -1.32
USP47-206ENST00000525367 SHISA3A0PJX4 238 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 RAB11FIP3O75154 756 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 RNF4P78317 190 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 ZAR1Q86SH2 424 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 ZNF227Q86WZ6 799 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 LRRN4CLQ8ND94 238 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 APBA2Q99767 749 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 ASPNQ9BXN1 380 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 GFOD1Q9NXC2 390 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 FBXL21Q9UKT6 434 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 RAXQ9Y2V3 346 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 SUGT1Q9Y2Z0 365 aa6.79□□□□□ -1.32
USP47-206ENST00000525367 MEIS1O00470 390 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 L1CAMP32004 1257 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 ZNF445P59923 1031 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 PPP2R5DQ14738 602 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 PRR23CQ6ZRP0 262 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 DTWD2Q8NBA8 298 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 EXOC2Q96KP1 924 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 FBXL18Q96ME1 805 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 PRDM5Q9NQX1 630 aaPredicted RBP6.78□□□□□ -1.32
USP47-206ENST00000525367 STOML1Q9UBI4 398 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 PCDHB12Q9Y5F1 795 aa6.78□□□□□ -1.32
USP47-206ENST00000525367 PPP1R12AO14974 1030 aaPredicted RBP6.77□□□□□ -1.33
USP47-206ENST00000525367 F13BP05160 661 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 PPP2R2AP63151 447 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 FAM209AQ5JX71 171 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 SFRP5Q5T4F7 317 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 NBPF11Q86T75 865 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 FAM181AQ8N9Y4 354 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 APPBP2Q92624 585 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 ZNF669Q96BR6 464 aaPredicted RBP6.77□□□□□ -1.33
USP47-206ENST00000525367 BRINP2Q9C0B6 783 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 EPN3Q9H201 632 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 NOL6Q9H6R4 1146 aaKnown RBP6.77□□□□□ -1.33
USP47-206ENST00000525367 LRP2BPQ9P2M1 347 aa6.77□□□□□ -1.33
USP47-206ENST00000525367 WASH4PA8MWX3 477 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 ASMTLO95671 621 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 ITGA4P13612 1032 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 ZNF143P52747 638 aaPredicted RBP6.76□□□□□ -1.33
USP47-206ENST00000525367 TNK2Q07912 1038 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 CBX2Q14781 532 aaPredicted RBP6.76□□□□□ -1.33
USP47-206ENST00000525367 SF1Q15637 639 aaKnown RBP6.76□□□□□ -1.33
USP47-206ENST00000525367 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 PLEKHG4Q58EX7 1191 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 PRSS36Q5K4E3 855 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 OGFOD3Q6PK18 319 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 HOMER1Q86YM7 354 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms