RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
SMCO4-202ENST00000525141 GREB1LQ9C091 1923 aaPredicted RBP14.98□□□□□ -0.01
SMCO4-202ENST00000525141 APPP05067 770 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 CAPN2P17655 700 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 ERCC3P19447 782 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 ATP2B2Q01814 1243 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 VPS53Q5VIR6 699 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 PLEKHM2Q8IWE5 1019 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 MKL1Q969V6 931 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 MKNK2Q9HBH9 465 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 NYAP2Q9P242 653 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 ZNFX1Q9P2E3 1918 aaKnown RBP14.97□□□□□ -0.01
SMCO4-202ENST00000525141 ROBO3Q96MS0 1386 aa14.97□□□□□ -0.01
SMCO4-202ENST00000525141 F5H6K3 240 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 WDR46O15213 610 aaKnown RBP14.96□□□□□ -0.01
SMCO4-202ENST00000525141 FLOT1O75955 427 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 KLRC3Q07444 240 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 FAM83BQ5T0W9 1011 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 WDR78Q5VTH9 848 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 TRMT44Q8IYL2 757 aaKnown RBP14.96□□□□□ -0.01
SMCO4-202ENST00000525141 TRPV1Q8NER1 839 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 REPS2Q8NFH8 660 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
SMCO4-202ENST00000525141 APBA2Q99767 749 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 CLIP2Q9UDT6 1046 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 PARP14Q460N5 1801 aa14.96□□□□□ -0.01
SMCO4-202ENST00000525141 STRNO43815 780 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 ZKSCAN1P17029 563 aaPredicted RBP14.95□□□□□ -0.02
SMCO4-202ENST00000525141 TDO2P48775 406 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 LRRFIP1Q32MZ4 808 aaKnown RBP14.95□□□□□ -0.02
SMCO4-202ENST00000525141 FAM47AQ5JRC9 791 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 CENPQQ7L2Z9 268 aaPredicted RBP14.95□□□□□ -0.02
SMCO4-202ENST00000525141 TICAM2Q86XR7 235 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 ZNF444Q8N0Y2 327 aaPredicted RBP14.95□□□□□ -0.02
SMCO4-202ENST00000525141 SHCBP1Q8NEM2 672 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 NEDD1Q8NHV4 660 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 EVI5LQ96CN4 794 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 SH2D4AQ9H788 454 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 MTMR4Q9NYA4 1195 aa14.95□□□□□ -0.02
SMCO4-202ENST00000525141 VWA5AO00534 786 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 ADORA2AP29274 412 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 CYP2C19P33261 490 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 PPARAQ07869 468 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 MB21D1Q8N884 522 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 ANKLE1Q8NAG6 615 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 CEP95Q96GE4 821 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 FAM227BQ96M60 508 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 HTATIP2Q9BUP3 242 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 PRO3102Q9H379 93 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 PPP1R9AQ9ULJ8 1098 aa14.94□□□□□ -0.02
SMCO4-202ENST00000525141 NDUFB10O96000 172 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 TFAP4Q01664 338 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 CTDSPL2Q05D32 466 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 PLS1Q14651 629 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 NECAB2Q7Z6G3 386 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 MROH8Q9H579 483 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 GOPCQ9HD26 462 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 IL17RBQ9NRM6 502 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 HELLSQ9NRZ9 838 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 ZNF214Q9UL59 606 aaPredicted RBP14.93□□□□□ -0.02
SMCO4-202ENST00000525141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMCO4-202ENST00000525141 ALPK3Q96L96 1907 aa14.93□□□□□ -0.02
SMCO4-202ENST00000525141 A0A0G2JMZ2 1700 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 COL11A1P12107 1806 aaPredicted RBP14.92□□□□□ -0.02
SMCO4-202ENST00000525141 A0A0D9SFI3 127 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 FGRP09769 529 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 COL6A1P12109 1028 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 STAT3P40763 770 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 ALX1Q15699 326 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 PRAMEF19Q5SWL8 479 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 DPP9Q86TI2 863 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 NCAPG2Q86XI2 1143 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 RIOX2Q8IUF8 465 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 CCDC136Q96JN2 1154 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 NACAP1Q9BZK3 213 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 NAPBQ9H115 298 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
SMCO4-202ENST00000525141 RIPK3Q9Y572 518 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 IVNS1ABPQ9Y6Y0 642 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 SMCHD1A6NHR9 2005 aa14.92□□□□□ -0.02
SMCO4-202ENST00000525141 RAD21O60216 631 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 FGAP02671 866 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 PDE4AP27815 886 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 MCMDC2Q4G0Z9 681 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 MFSD14CQ5VZR4 134 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 OLFML2BQ68BL8 750 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 ABRAQ8N0Z2 381 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 NBPF3Q9H094 633 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 ANAPC4Q9UJX5 808 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 PFASO15067 1338 aa14.91□□□□□ -0.02
SMCO4-202ENST00000525141 TRIOBPQ9H2D6 2365 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 EVI5O60447 810 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 NMT2O60551 498 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 SLC25A27O95847 323 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 CYBAP13498 195 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 NOVP48745 357 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 NMIQ13287 307 aaPredicted RBP14.9□□□□□ -0.02
SMCO4-202ENST00000525141 ZNF792Q3KQV3 632 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms