RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 IL1R1P14778 569 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 PLCG2P16885 1265 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 HOXA10P31260 410 aaPredicted RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 DYNLL1P63167 89 aaKnown RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 CFAP100Q494V2 611 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 ZNF662Q6ZS27 426 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 SEPT12Q8IYM1 358 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 TC2NQ8N9U0 490 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 NOC3LQ8WTT2 800 aaKnown RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 NUP133Q8WUM0 1156 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 DPF2Q92785 391 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 ERCC4Q92889 916 aaPredicted RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 AK8Q96MA6 479 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 ZKSCAN3Q9BRR0 538 aa6.2□□□□□ -1.42
CLINT1-208ENST00000524306 ADD3Q9UEY8 706 aaKnown RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 DDX41Q9UJV9 622 aaKnown RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 RTCBQ9Y3I0 505 aaKnown RBP6.2□□□□□ -1.42
CLINT1-208ENST00000524306 CDK5RAP2Q96SN8 1893 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 PALM3A6NDB9 673 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 NUTM2BA6NNL0 878 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 NUTM2EB1AL46 878 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 PPP1R3GB7ZBB8 358 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 UBE2Q2LH0YL09 131 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 ZPR1O75312 459 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 PLEKHA8P1O95397 391 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 PRR29P0C7W0 189 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 H2AFXP16104 143 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 GRIN1Q05586 938 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.422e-6■■■■□ 24.2
CLINT1-208ENST00000524306 NBPF5PQ86XG9 351 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 AMOTL1Q8IY63 956 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 SYMPKQ92797 1274 aaKnown RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 IQCDQ96DY2 449 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 MED15Q96RN5 788 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 TOMM22Q9NS69 142 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 VPS54Q9P1Q0 977 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 BAZ2AQ9UIF9 1905 aaKnown RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 GAKO14976 1311 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 A0A087WWV3 80 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 KCNQ2O43526 872 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 ATP2B4P23634 1241 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 ZNF658Q5TYW1 1059 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 ZNF804AQ7Z570 1209 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 SLF2Q8IX21 1173 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 BLIDQ8IZY5 108 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 CCDC12Q8WUD4 166 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 BAG1Q99933 345 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 MYO1AQ9UBC5 1043 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 SYNRGQ9UMZ2 1314 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 A0A087X0B3 334 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 GPR75-ASB3A0A0A6YYF3 556 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 EFCAB8A8MWE9 144 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 FOXN1O15353 648 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 GABPB1Q06547 395 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 FILIP1LQ4L180 1135 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 CNNM4Q6P4Q7 775 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 KRT27Q7Z3Y8 459 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 MSL3Q8N5Y2 521 aaKnown RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 KAT14Q9H8E8 782 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 CCNL1Q9UK58 526 aaPredicted RBP6.19□□□□□ -1.42
CLINT1-208ENST00000524306 PPP2R2CQ9Y2T4 447 aa6.19□□□□□ -1.42
CLINT1-208ENST00000524306 FAM205AQ6ZU69 1335 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 A0A1W2PQC6 194 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 AKR1B15C9JRZ8 316 aaPredicted RBP6.18□□□□□ -1.42
CLINT1-208ENST00000524306 H7C1D1 291 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 LDHBP07195 334 aaKnown RBP6.18□□□□□ -1.42
CLINT1-208ENST00000524306 TXLNAP40222 546 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 NLRP5P59047 1200 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 PTGDRQ13258 359 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 EARS2Q5JPH6 523 aaKnown RBP6.18□□□□□ -1.42
CLINT1-208ENST00000524306 PPP4R3BQ5MIZ7 849 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 MEX3CQ5U5Q3 659 aaKnown RBP6.18□□□□□ -1.42
CLINT1-208ENST00000524306 C16orf86Q6ZW13 317 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 NEDD1Q8NHV4 660 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 TBC1D22AQ8WUA7 517 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 ZMYND12Q9H0C1 365 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 BARHL2Q9NY43 387 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 ZNF215Q9UL58 517 aaPredicted RBP6.18□□□□□ -1.42
CLINT1-208ENST00000524306 VWA3AA6NCI4 1184 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 TSPY2A6NKD2 308 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 MAP3K9P80192 1104 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 GRIPAP1Q4V328 841 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 PPP1R18Q6NYC8 613 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 DZIP1Q86YF9 867 aaKnown RBP6.18□□□□□ -1.42
CLINT1-208ENST00000524306 AKT1S1Q96B36 256 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 RTFDC1Q9BY42 306 aaPredicted RBP6.18□□□□□ -1.42
CLINT1-208ENST00000524306 THAP9Q9H5L6 903 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 IL17RBQ9NRM6 502 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 MAD2L2Q9UI95 211 aa6.18□□□□□ -1.42
CLINT1-208ENST00000524306 SNED1Q8TER0 1413 aa6.17□□□□□ -1.42
CLINT1-208ENST00000524306 FAM177BA6PVY3 158 aa6.17□□□□□ -1.42
CLINT1-208ENST00000524306 BBOX1O75936 387 aa6.17□□□□□ -1.42
CLINT1-208ENST00000524306 TUBBP07437 444 aa6.17□□□□□ -1.42
CLINT1-208ENST00000524306 CDK11BP21127 795 aaKnown RBP6.17□□□□□ -1.42
CLINT1-208ENST00000524306 EEF1GP26641 437 aaKnown RBP6.17□□□□□ -1.42
CLINT1-208ENST00000524306 PRDX5P30044 214 aa6.17□□□□□ -1.42
CLINT1-208ENST00000524306 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms