RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 HOXC6P09630 235 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 FGRP09769 529 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
CCNC-213ENST00000523541 KLRC3Q07444 240 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 MAP2K5Q13163 448 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 PLS1Q14651 629 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 CCDC129Q6ZRS4 1044 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 FAM227BQ96M60 508 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 HTATIP2Q9BUP3 242 aa20.48■□□□□ 0.87
CCNC-213ENST00000523541 A0A0D9SFI3 127 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 PRDM1O75626 825 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 SLC25A27O95847 323 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 FGAP02671 866 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 HSPD1P10809 573 aaKnown RBP20.47■□□□□ 0.87
CCNC-213ENST00000523541 TFAP4Q01664 338 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 NMIQ13287 307 aaPredicted RBP20.47■□□□□ 0.87
CCNC-213ENST00000523541 ABRAQ8N0Z2 381 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 GMCL1P1Q8NEA9 526 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 TRIB2Q92519 343 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 CEP95Q96GE4 821 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 APBA2Q99767 749 aa20.47■□□□□ 0.87
CCNC-213ENST00000523541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.47■□□□□ 0.87
CCNC-213ENST00000523541 ORC4O43929 436 aa20.46■□□□□ 0.87
CCNC-213ENST00000523541 COPB2P35606 906 aa20.46■□□□□ 0.87
CCNC-213ENST00000523541 TRIM32Q13049 653 aa20.46■□□□□ 0.87
CCNC-213ENST00000523541 GRB14Q14449 540 aa20.46■□□□□ 0.87
CCNC-213ENST00000523541 MAP3K21Q5TCX8 1036 aa20.46■□□□□ 0.87
CCNC-213ENST00000523541 VPS53Q5VIR6 699 aa20.46■□□□□ 0.87
CCNC-213ENST00000523541 MOV10L1Q9BXT6 1211 aaKnown RBP20.46■□□□□ 0.87
CCNC-213ENST00000523541 PPP1R9AQ9ULJ8 1098 aa20.46■□□□□ 0.87
CCNC-213ENST00000523541 CCDC171Q6TFL3 1326 aa20.46■□□□□ 0.87
CCNC-213ENST00000523541 FDX1P10109 184 aa20.45■□□□□ 0.86
CCNC-213ENST00000523541 PRKAR2AP13861 404 aaKnown RBP20.45■□□□□ 0.86
CCNC-213ENST00000523541 PRPF38AQ8NAV1 312 aaKnown RBP20.45■□□□□ 0.86
CCNC-213ENST00000523541 CRISPLD2Q9H0B8 497 aa20.45■□□□□ 0.86
CCNC-213ENST00000523541 SLC5A4Q9NY91 659 aa20.45■□□□□ 0.86
CCNC-213ENST00000523541 TSPY2A6NKD2 308 aa20.44■□□□□ 0.86
CCNC-213ENST00000523541 VWA5AO00534 786 aa20.44■□□□□ 0.86
CCNC-213ENST00000523541 FAM83BQ5T0W9 1011 aa20.44■□□□□ 0.86
CCNC-213ENST00000523541 ANKLE1Q8NAG6 615 aa20.44■□□□□ 0.86
CCNC-213ENST00000523541 ATG4CQ96DT6 458 aa20.44■□□□□ 0.86
CCNC-213ENST00000523541 DIAPH3Q9NSV4 1193 aa20.44■□□□□ 0.86
CCNC-213ENST00000523541 PLXNB2O15031 1838 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 GREB1LQ9C091 1923 aaPredicted RBP20.43■□□□□ 0.86
CCNC-213ENST00000523541 NDUFB10O96000 172 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 ERCC3P19447 782 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 NOVP48745 357 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 TMEM132BQ14DG7 1078 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 CCL14Q16627 93 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 UBE2Q1Q7Z7E8 422 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 DPP9Q86TI2 863 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 NCAPG2Q86XI2 1143 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 RIOX2Q8IUF8 465 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 SLF1Q9BQI6 1058 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 TCP11L1Q9NUJ3 509 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 FEM1BQ9UK73 627 aa20.43■□□□□ 0.86
CCNC-213ENST00000523541 ATP2A1O14983 1001 aa20.42■□□□□ 0.86
CCNC-213ENST00000523541 STAT3P40763 770 aa20.42■□□□□ 0.86
CCNC-213ENST00000523541 CTDSPL2Q05D32 466 aa20.42■□□□□ 0.86
CCNC-213ENST00000523541 FAM47AQ5JRC9 791 aa20.42■□□□□ 0.86
CCNC-213ENST00000523541 MFSD14CQ5VZR4 134 aa20.42■□□□□ 0.86
CCNC-213ENST00000523541 ZNF589Q86UQ0 364 aaPredicted RBP20.42■□□□□ 0.86
CCNC-213ENST00000523541 RNF41Q9H4P4 317 aaPredicted RBP20.42■□□□□ 0.86
CCNC-213ENST00000523541 ISY1Q9ULR0 285 aaKnown RBP20.42■□□□□ 0.86
CCNC-213ENST00000523541 RANBP6O60518 1105 aaKnown RBP20.41■□□□□ 0.86
CCNC-213ENST00000523541 PLA2G6O60733 806 aa20.41■□□□□ 0.86
CCNC-213ENST00000523541 FCER1AP12319 257 aa20.41■□□□□ 0.86
CCNC-213ENST00000523541 OLFML2BQ68BL8 750 aa20.41■□□□□ 0.86
CCNC-213ENST00000523541 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
CCNC-213ENST00000523541 GMCL1Q96IK5 515 aa20.41■□□□□ 0.86
CCNC-213ENST00000523541 FBXO28Q9NVF7 368 aa20.41■□□□□ 0.86
CCNC-213ENST00000523541 CTDP1Q9Y5B0 961 aaPredicted RBP20.41■□□□□ 0.86
CCNC-213ENST00000523541 H0YGN5 161 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 ZBED4O75132 1171 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 BMP3P12645 472 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 IRX6P78412 446 aaPredicted RBP20.4■□□□□ 0.86
CCNC-213ENST00000523541 CACNB2Q08289 660 aaPredicted RBP20.4■□□□□ 0.86
CCNC-213ENST00000523541 RLFQ13129 1914 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 TTC22Q5TAA0 569 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 SLFN13Q68D06 897 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 MFSD6Q6ZSS7 791 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 NECAB2Q7Z6G3 386 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 CHURC1Q8WUH1 139 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 PAWRQ96IZ0 340 aaKnown RBP20.4■□□□□ 0.86
CCNC-213ENST00000523541 TTC14Q96N46 770 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 DSCC1Q9BVC3 393 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 CTNNA3Q9UI47 895 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 ZNF214Q9UL59 606 aaPredicted RBP20.4■□□□□ 0.86
CCNC-213ENST00000523541 NR2E3Q9Y5X4 410 aa20.4■□□□□ 0.86
CCNC-213ENST00000523541 ZNF213O14771 459 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 IGHA2P01877 340 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 PDE4AP27815 886 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 ADORA2AP29274 412 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 CNGA1P29973 690 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 OAZ1P54368 228 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 AKNAD1Q5T1N1 836 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 FAM160B2Q86V87 743 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 REPS2Q8NFH8 660 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 STAG1Q8WVM7 1258 aa20.39■□□□□ 0.85
CCNC-213ENST00000523541 TEX13BQ9BXU2 312 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms