RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 LMCD1Q9NZU5 365 aa7.32□□□□□ -1.24
PCM1-219ENST00000523540 PRKAG3Q9UGI9 489 aa7.32□□□□□ -1.24
PCM1-219ENST00000523540 ST14Q9Y5Y6 855 aa7.32□□□□□ -1.24
PCM1-219ENST00000523540 LTBP3Q9NS15 1303 aa7.31□□□□□ -1.24
PCM1-219ENST00000523540 FAM86C2PA6NEL3 165 aa7.31□□□□□ -1.24
PCM1-219ENST00000523540 SMAD7O15105 426 aaKnown RBP7.31□□□□□ -1.24
PCM1-219ENST00000523540 SF3A1Q15459 793 aaKnown RBP7.31□□□□□ -1.24
PCM1-219ENST00000523540 PKN1Q16512 942 aa7.31□□□□□ -1.24
PCM1-219ENST00000523540 KSR1Q8IVT5 923 aa7.31□□□□□ -1.24
PCM1-219ENST00000523540 SLC6A18Q96N87 628 aa7.31□□□□□ -1.24
PCM1-219ENST00000523540 GPR62Q9BZJ7 368 aa7.31□□□□□ -1.24
PCM1-219ENST00000523540 PRR13Q9NZ81 148 aa7.31□□□□□ -1.24
PCM1-219ENST00000523540 KCNH3Q9ULD8 1083 aa7.31□□□□□ -1.24
PCM1-219ENST00000523540 SRFP11831 508 aa7.3□□□□□ -1.24
PCM1-219ENST00000523540 NBPF12Q5TAG4 269 aaPredicted RBP7.3□□□□□ -1.24
PCM1-219ENST00000523540 TMPRSS7Q7RTY8 843 aa7.3□□□□□ -1.24
PCM1-219ENST00000523540 LRRN4CLQ8ND94 238 aa7.3□□□□□ -1.24
PCM1-219ENST00000523540 ARMC5Q96C12 935 aa7.3□□□□□ -1.24
PCM1-219ENST00000523540 Q96M66 194 aa7.3□□□□□ -1.24
PCM1-219ENST00000523540 TRIT1Q9H3H1 467 aaKnown RBP7.3□□□□□ -1.24
PCM1-219ENST00000523540 SEMA3GQ9NS98 782 aa7.3□□□□□ -1.24
PCM1-219ENST00000523540 SUCOQ9UBS9 1254 aaKnown RBP7.3□□□□□ -1.24
PCM1-219ENST00000523540 FAM155AB1AL88 458 aaPredicted RBP7.29□□□□□ -1.24
PCM1-219ENST00000523540 LRRN2O75325 713 aa7.29□□□□□ -1.24
PCM1-219ENST00000523540 CLEC3AO75596 197 aa7.29□□□□□ -1.24
PCM1-219ENST00000523540 CBX7O95931 251 aa7.29□□□□□ -1.24
PCM1-219ENST00000523540 PPP2R5EQ16537 467 aa7.29□□□□□ -1.24
PCM1-219ENST00000523540 TNNI3KQ59H18 835 aa7.29□□□□□ -1.24
PCM1-219ENST00000523540 ANGEL2Q5VTE6 544 aaKnown RBP7.29□□□□□ -1.24
PCM1-219ENST00000523540 ENOX1Q8TC92 643 aaKnown RBP7.29□□□□□ -1.24
PCM1-219ENST00000523540 DHX38Q92620 1227 aaKnown RBP7.29□□□□□ -1.24
PCM1-219ENST00000523540 FAM84AQ96KN4 292 aa7.29□□□□□ -1.24
PCM1-219ENST00000523540 DHRS1Q96LJ7 313 aa7.29□□□□□ -1.24
PCM1-219ENST00000523540 ZNF214Q9UL59 606 aaPredicted RBP7.29□□□□□ -1.24
PCM1-219ENST00000523540 SLC12A7Q9Y666 1083 aa7.29□□□□□ -1.24
PCM1-219ENST00000523540 KLF4O43474 513 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 STK10O94804 968 aaKnown RBP7.28□□□□□ -1.24
PCM1-219ENST00000523540 ITIH2P19823 946 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 GTF2F1P35269 517 aaKnown RBP eCLIP7.28□□□□□ -1.24
PCM1-219ENST00000523540 PMS1P54277 932 aaKnown RBP7.28□□□□□ -1.24
PCM1-219ENST00000523540 RBL2Q08999 1139 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 AOC3Q16853 763 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 LCE5AQ5TCM9 118 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 ANKS3Q6ZW76 656 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 PPFIBP1Q86W92 1011 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 DTWD2Q8NBA8 298 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 SMARCC1Q92922 1105 aaPredicted RBP7.28□□□□□ -1.24
PCM1-219ENST00000523540 ZNF512BQ96KM6 892 aaPredicted RBP7.28□□□□□ -1.24
PCM1-219ENST00000523540 DRC1Q96MC2 740 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 SLC38A3Q99624 504 aa7.28□□□□□ -1.24
PCM1-219ENST00000523540 C9IYK1 514 aa7.27□□□□□ -1.25
PCM1-219ENST00000523540 CD96P40200 585 aa7.27□□□□□ -1.25
PCM1-219ENST00000523540 TNK2Q07912 1038 aa7.27□□□□□ -1.25
PCM1-219ENST00000523540 FLAD1Q8NFF5 587 aa7.27□□□□□ -1.25
PCM1-219ENST00000523540 PI4K2BQ8TCG2 481 aa7.27□□□□□ -1.25
PCM1-219ENST00000523540 CCDC120Q96HB5 630 aa7.27□□□□□ -1.25
PCM1-219ENST00000523540 PHAXQ9H814 394 aaKnown RBP7.27□□□□□ -1.25
PCM1-219ENST00000523540 ACTR10Q9NZ32 417 aa7.27□□□□□ -1.25
PCM1-219ENST00000523540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.27□□□□□ -1.25
PCM1-219ENST00000523540 CHMP4BP1P59074 171 aa7.26□□□□□ -1.25
PCM1-219ENST00000523540 NBPF9Q3BBW0 867 aa7.26□□□□□ -1.25
PCM1-219ENST00000523540 SLC23A3Q6PIS1 610 aa7.26□□□□□ -1.25
PCM1-219ENST00000523540 HNRNPLLQ8WVV9 542 aaKnown RBP7.26□□□□□ -1.25
PCM1-219ENST00000523540 PCDHB10Q9UN67 800 aa7.26□□□□□ -1.25
PCM1-219ENST00000523540 GAB4Q2WGN9 574 aa7.25□□□□□ -1.25
PCM1-219ENST00000523540 C1QL4Q86Z23 238 aa7.25□□□□□ -1.25
PCM1-219ENST00000523540 KLHL6Q8WZ60 621 aa7.25□□□□□ -1.25
PCM1-219ENST00000523540 HSPA12BQ96MM6 686 aa7.25□□□□□ -1.25
PCM1-219ENST00000523540 GPATCH2Q9NW75 528 aa7.25□□□□□ -1.25
PCM1-219ENST00000523540 RAB33AQ14088 237 aa7.24□□□□□ -1.25
PCM1-219ENST00000523540 BBS9Q3SYG4 887 aa7.24□□□□□ -1.25
PCM1-219ENST00000523540 GNPTABQ3T906 1256 aa7.24□□□□□ -1.25
PCM1-219ENST00000523540 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
PCM1-219ENST00000523540 AXDND1Q5T1B0 1012 aaPredicted RBP7.24□□□□□ -1.25
PCM1-219ENST00000523540 TDRD10Q5VZ19 366 aaKnown RBP7.24□□□□□ -1.25
PCM1-219ENST00000523540 TSPYL5Q86VY4 417 aaPredicted RBP7.24□□□□□ -1.25
PCM1-219ENST00000523540 MICAL1Q8TDZ2 1067 aa7.24□□□□□ -1.25
PCM1-219ENST00000523540 HIRIP3Q9BW71 556 aaPredicted RBP7.24□□□□□ -1.25
PCM1-219ENST00000523540 MKRN2Q9H000 416 aaKnown RBP7.24□□□□□ -1.25
PCM1-219ENST00000523540 DUSP15Q9H1R2 295 aaPredicted RBP7.24□□□□□ -1.25
PCM1-219ENST00000523540 PPP1R1BQ9UD71 204 aaPredicted RBP7.24□□□□□ -1.25
PCM1-219ENST00000523540 ZNF503-AS2A6NEH8 195 aa7.23□□□□□ -1.25
PCM1-219ENST00000523540 SHOXO15266 292 aa7.23□□□□□ -1.25
PCM1-219ENST00000523540 TP53P04637 393 aaPredicted RBP7.23□□□□□ -1.25
PCM1-219ENST00000523540 SLC7A5Q01650 507 aa7.23□□□□□ -1.25
PCM1-219ENST00000523540 AUHQ13825 339 aaKnown RBP7.23□□□□□ -1.25
PCM1-219ENST00000523540 CDKAL1Q5VV42 579 aa7.23□□□□□ -1.25
PCM1-219ENST00000523540 LARP1BQ659C4 914 aaKnown RBP7.23□□□□□ -1.25
PCM1-219ENST00000523540 VHLLQ6RSH7 139 aa7.23□□□□□ -1.25
PCM1-219ENST00000523540 CCDC144CPQ8IYA2 1237 aa7.23□□□□□ -1.25
PCM1-219ENST00000523540 CKAP2LQ8IYA6 745 aa7.23□□□□□ -1.25
PCM1-219ENST00000523540 CELF2-AS1Q8N7Q2 184 aa7.23□□□□□ -1.25
PCM1-219ENST00000523540 SYTL5Q8TDW5 730 aaPredicted RBP7.23□□□□□ -1.25
PCM1-219ENST00000523540 CFPP27918 469 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 SNW1Q13573 536 aaKnown RBP7.22□□□□□ -1.25
PCM1-219ENST00000523540 FXNQ16595 210 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 DCAF15Q66K64 600 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 KIAA1211LQ6NV74 962 aa7.22□□□□□ -1.25
PCM1-219ENST00000523540 C6orf15Q6UXA7 325 aaPredicted RBP7.22□□□□□ -1.25
PCM1-219ENST00000523540 C7orf61Q8IZ16 206 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms