RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 KIAA1755Q5JYT7 1200 aa19.28■□□□□ 0.68
LSM1-205ENST00000523511 MORN1Q5T089 497 aa19.28■□□□□ 0.68
LSM1-205ENST00000523511 FAM83BQ5T0W9 1011 aa19.28■□□□□ 0.68
LSM1-205ENST00000523511 MFSD6Q6ZSS7 791 aa19.28■□□□□ 0.68
LSM1-205ENST00000523511 DPP9Q86TI2 863 aa19.28■□□□□ 0.68
LSM1-205ENST00000523511 GMCL1P1Q8NEA9 526 aa19.28■□□□□ 0.68
LSM1-205ENST00000523511 PPP1R9AQ9ULJ8 1098 aa19.28■□□□□ 0.68
LSM1-205ENST00000523511 STX8Q9UNK0 236 aa19.28■□□□□ 0.68
LSM1-205ENST00000523511 RPTORQ8N122 1335 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 ORC4O43929 436 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 PEX10O60683 326 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 ZBED4O75132 1171 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 SGPL1O95470 568 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 FDX1P10109 184 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 NCAPG2Q86XI2 1143 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 ATG4CQ96DT6 458 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 APBA2Q99767 749 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 SLF1Q9BQI6 1058 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 MOV10L1Q9BXT6 1211 aaKnown RBP19.27■□□□□ 0.68
LSM1-205ENST00000523511 UNC93B1Q9H1C4 597 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 FEM1BQ9UK73 627 aa19.27■□□□□ 0.68
LSM1-205ENST00000523511 NDUFB10O96000 172 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 ERCC3P19447 782 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 STAT3P40763 770 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 RRP12Q5JTH9 1297 aaKnown RBP19.26■□□□□ 0.67
LSM1-205ENST00000523511 TTC22Q5TAA0 569 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 MFSD14CQ5VZR4 134 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 SLFN13Q68D06 897 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 POTEEQ6S8J3 1075 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 ABRAQ8N0Z2 381 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 U2AF1L4Q8WU68 220 aaKnown RBP19.26■□□□□ 0.67
LSM1-205ENST00000523511 CHURC1Q8WUH1 139 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 ISY1Q9ULR0 285 aaKnown RBP19.26■□□□□ 0.67
LSM1-205ENST00000523511 ADAMTS5Q9UNA0 930 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.26■□□□□ 0.67
LSM1-205ENST00000523511 PLIN4Q96Q06 1357 aa19.26■□□□□ 0.67
LSM1-205ENST00000523511 VWA5AO00534 786 aa19.25■□□□□ 0.67
LSM1-205ENST00000523511 FOXP2O15409 715 aa19.25■□□□□ 0.67
LSM1-205ENST00000523511 FGRP09769 529 aa19.25■□□□□ 0.67
LSM1-205ENST00000523511 FCER1AP12319 257 aa19.25■□□□□ 0.67
LSM1-205ENST00000523511 BMP3P12645 472 aa19.25■□□□□ 0.67
LSM1-205ENST00000523511 ZNF589Q86UQ0 364 aaPredicted RBP19.25■□□□□ 0.67
LSM1-205ENST00000523511 USP6NLQ92738 828 aa19.25■□□□□ 0.67
LSM1-205ENST00000523511 BAZ2AQ9UIF9 1905 aaKnown RBP19.24■□□□□ 0.67
LSM1-205ENST00000523511 HOXC6P09630 235 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 SLC1A4P43007 532 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 GRB14Q14449 540 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 IMMTQ16891 758 aaKnown RBP19.24■□□□□ 0.67
LSM1-205ENST00000523511 CCDC178Q5BJE1 867 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 ESR2Q92731 530 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 TTC14Q96N46 770 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 DEFB118Q96PH6 123 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 DSCC1Q9BVC3 393 aa19.24■□□□□ 0.67
LSM1-205ENST00000523511 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.24■□□□□ 0.67
LSM1-205ENST00000523511 PDE4AP27815 886 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
LSM1-205ENST00000523511 KCTD2Q14681 263 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 TMEM132BQ14DG7 1078 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 FAM160B2Q86V87 743 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 LRRC47Q8N1G4 583 aaKnown RBP19.23■□□□□ 0.67
LSM1-205ENST00000523511 TRIB2Q92519 343 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 GMCL1Q96IK5 515 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 HTATIP2Q9BUP3 242 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 PAK6Q9NQU5 681 aaPredicted RBP19.23■□□□□ 0.67
LSM1-205ENST00000523511 TCP11L1Q9NUJ3 509 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 FBXO28Q9NVF7 368 aa19.23■□□□□ 0.67
LSM1-205ENST00000523511 STAT2P52630 851 aa19.22■□□□□ 0.67
LSM1-205ENST00000523511 CENPQQ7L2Z9 268 aaPredicted RBP19.22■□□□□ 0.67
LSM1-205ENST00000523511 STAG1Q8WVM7 1258 aa19.22■□□□□ 0.67
LSM1-205ENST00000523511 KIFC2Q96AC6 838 aa19.22■□□□□ 0.67
LSM1-205ENST00000523511 NUP88Q99567 741 aaPredicted RBP19.22■□□□□ 0.67
LSM1-205ENST00000523511 TEX13BQ9BXU2 312 aa19.22■□□□□ 0.67
LSM1-205ENST00000523511 PRKAR2AP13861 404 aaKnown RBP19.21■□□□□ 0.67
LSM1-205ENST00000523511 ADORA2AP29274 412 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 OAZ1P54368 228 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 HAND2P61296 217 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 RCSD1Q6JBY9 416 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 IQCA1Q86XH1 822 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 ANKLE1Q8NAG6 615 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 MMP19Q99542 508 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 INCENPQ9NQS7 918 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 RAD50Q92878 1312 aa19.21■□□□□ 0.67
LSM1-205ENST00000523511 TMEM232C9JQI7 657 aa19.2■□□□□ 0.66
LSM1-205ENST00000523511 ATP2A1O14983 1001 aa19.2■□□□□ 0.66
LSM1-205ENST00000523511 PLA2G6O60733 806 aa19.2■□□□□ 0.66
LSM1-205ENST00000523511 TOP1P11387 765 aaKnown RBP19.2■□□□□ 0.66
LSM1-205ENST00000523511 MCCP23508 829 aa19.2■□□□□ 0.66
LSM1-205ENST00000523511 PRPF38BQ5VTL8 546 aaKnown RBP19.2■□□□□ 0.66
LSM1-205ENST00000523511 CNNM2Q9H8M5 875 aa19.2■□□□□ 0.66
LSM1-205ENST00000523511 IL17RBQ9NRM6 502 aa19.2■□□□□ 0.66
LSM1-205ENST00000523511 FBXO40Q9UH90 709 aa19.2■□□□□ 0.66
LSM1-205ENST00000523511 ZSWIM8A7E2V4 1837 aa19.19■□□□□ 0.66
LSM1-205ENST00000523511 MSCO60682 206 aa19.19■□□□□ 0.66
LSM1-205ENST00000523511 FARP2O94887 1054 aaPredicted RBP19.19■□□□□ 0.66
LSM1-205ENST00000523511 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
LSM1-205ENST00000523511 CACNB2Q08289 660 aaPredicted RBP19.19■□□□□ 0.66
LSM1-205ENST00000523511 MAP3K21Q5TCX8 1036 aa19.19■□□□□ 0.66
LSM1-205ENST00000523511 OLFML2BQ68BL8 750 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms