RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ADD2P35612 726 aa31.24■■■□□ 2.59
PVT1-219ENST00000523427 AMOTL1Q8IY63 956 aa31.24■■■□□ 2.59
PVT1-219ENST00000523427 ABRAQ8N0Z2 381 aa31.24■■■□□ 2.59
PVT1-219ENST00000523427 PDLIM7Q9NR12 457 aa31.24■■■□□ 2.59
PVT1-219ENST00000523427 ATP8A2Q9NTI2 1148 aa31.24■■■□□ 2.59
PVT1-219ENST00000523427 TLE2Q04725 743 aa31.23■■■□□ 2.59
PVT1-219ENST00000523427 C12orf60Q5U649 245 aa31.23■■■□□ 2.59
PVT1-219ENST00000523427 CCDC17Q96LX7 622 aa31.23■■■□□ 2.59
PVT1-219ENST00000523427 XPNPEP3Q9NQH7 507 aa31.23■■■□□ 2.59
PVT1-219ENST00000523427 ZNF236Q9UL36 1845 aa31.23■■■□□ 2.59
PVT1-219ENST00000523427 TRIM43BA6NCK2 446 aa31.22■■■□□ 2.59
PVT1-219ENST00000523427 SLC25A27O95847 323 aa31.22■■■□□ 2.59
PVT1-219ENST00000523427 TRIM43Q96BQ3 446 aaPredicted RBP31.22■■■□□ 2.59
PVT1-219ENST00000523427 CDX2Q99626 313 aaPredicted RBP31.22■■■□□ 2.59
PVT1-219ENST00000523427 HMMRO75330 724 aa31.21■■■□□ 2.59
PVT1-219ENST00000523427 PGK1P00558 417 aa31.21■■■□□ 2.59
PVT1-219ENST00000523427 RARBP10826 455 aa31.21■■■□□ 2.59
PVT1-219ENST00000523427 KCTD2Q14681 263 aa31.21■■■□□ 2.59
PVT1-219ENST00000523427 SNX17Q15036 470 aa31.21■■■□□ 2.59
PVT1-219ENST00000523427 DDRGK1Q96HY6 314 aa31.21■■■□□ 2.59
PVT1-219ENST00000523427 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.21■■■□□ 2.59
PVT1-219ENST00000523427 UNC80Q8N2C7 3258 aa31.21■■■□□ 2.59
PVT1-219ENST00000523427 A0A0G2JMZ2 1700 aa31.21■■■□□ 2.59
PVT1-219ENST00000523427 LTBP2Q14767 1821 aa31.2■■■□□ 2.59
PVT1-219ENST00000523427 TAL1P17542 331 aaPredicted RBP31.2■■■□□ 2.59
PVT1-219ENST00000523427 SIRT2Q8IXJ6 389 aa31.2■■■□□ 2.59
PVT1-219ENST00000523427 STK11IPQ8N1F8 1099 aa31.2■■■□□ 2.59
PVT1-219ENST00000523427 SEMA6BQ9H3T3 888 aa31.2■■■□□ 2.59
PVT1-219ENST00000523427 SLC4A4Q9Y6R1 1079 aa31.2■■■□□ 2.59
PVT1-219ENST00000523427 STAT3P40763 770 aa31.19■■■□□ 2.58
PVT1-219ENST00000523427 RPAP2Q8IXW5 612 aaPredicted RBP31.19■■■□□ 2.58
PVT1-219ENST00000523427 LENG1Q96BZ8 264 aaPredicted RBP31.19■■■□□ 2.58
PVT1-219ENST00000523427 TINF2Q9BSI4 451 aa31.19■■■□□ 2.58
PVT1-219ENST00000523427 COG6Q9Y2V7 657 aa31.19■■■□□ 2.58
PVT1-219ENST00000523427 BAZ2AQ9UIF9 1905 aaKnown RBP31.19■■■□□ 2.58
PVT1-219ENST00000523427 FAM83BQ5T0W9 1011 aa31.18■■■□□ 2.58
PVT1-219ENST00000523427 C16orf86Q6ZW13 317 aa31.18■■■□□ 2.58
PVT1-219ENST00000523427 RIOX2Q8IUF8 465 aa31.18■■■□□ 2.58
PVT1-219ENST00000523427 KANSL2Q9H9L4 492 aa31.18■■■□□ 2.58
PVT1-219ENST00000523427 MYH8P13535 1937 aa31.18■■■□□ 2.58
PVT1-219ENST00000523427 SMCHD1A6NHR9 2005 aa31.17■■■□□ 2.58
PVT1-219ENST00000523427 PQBP1O60828 265 aaKnown RBP31.17■■■□□ 2.58
PVT1-219ENST00000523427 SLC4A3P48751 1232 aa31.17■■■□□ 2.58
PVT1-219ENST00000523427 RNF180Q86T96 592 aa31.17■■■□□ 2.58
PVT1-219ENST00000523427 GOPCQ9HD26 462 aa31.17■■■□□ 2.58
PVT1-219ENST00000523427 PHF24Q9UPV7 400 aa31.17■■■□□ 2.58
PVT1-219ENST00000523427 VWA5AO00534 786 aa31.16■■■□□ 2.58
PVT1-219ENST00000523427 RAB11FIP3O75154 756 aa31.16■■■□□ 2.58
PVT1-219ENST00000523427 ATP5JP18859 108 aa31.16■■■□□ 2.58
PVT1-219ENST00000523427 ITGB8P26012 769 aa31.16■■■□□ 2.58
PVT1-219ENST00000523427 MYLIPQ8WY64 445 aa31.16■■■□□ 2.58
PVT1-219ENST00000523427 NUP88Q99567 741 aaPredicted RBP31.16■■■□□ 2.58
PVT1-219ENST00000523427 PPP1R9AQ9ULJ8 1098 aa31.16■■■□□ 2.58
PVT1-219ENST00000523427 ADAMTS5Q9UNA0 930 aa31.16■■■□□ 2.58
PVT1-219ENST00000523427 TACC3Q9Y6A5 838 aa31.16■■■□□ 2.58
PVT1-219ENST00000523427 ZNF792Q3KQV3 632 aa31.15■■■□□ 2.58
PVT1-219ENST00000523427 CTR9Q6PD62 1173 aa31.15■■■□□ 2.58
PVT1-219ENST00000523427 MAFAQ8NHW3 353 aaPredicted RBP31.15■■■□□ 2.58
PVT1-219ENST00000523427 HAUS7Q99871 368 aa31.15■■■□□ 2.58
PVT1-219ENST00000523427 ZNFX1Q9P2E3 1918 aaKnown RBP31.15■■■□□ 2.58
PVT1-219ENST00000523427 CLTBP09497 229 aa31.14■■■□□ 2.58
PVT1-219ENST00000523427 MS4A1P11836 297 aa31.14■■■□□ 2.58
PVT1-219ENST00000523427 NRBP1Q9UHY1 535 aa31.14■■■□□ 2.58
PVT1-219ENST00000523427 RAG1P15918 1043 aa31.13■■■□□ 2.57
PVT1-219ENST00000523427 EPHB4P54760 987 aa31.13■■■□□ 2.57
PVT1-219ENST00000523427 C1orf53Q5VUE5 145 aa31.13■■■□□ 2.57
PVT1-219ENST00000523427 MIER1Q8N108 512 aa31.13■■■□□ 2.57
PVT1-219ENST00000523427 RNPC3Q96LT9 517 aaKnown RBP31.13■■■□□ 2.57
PVT1-219ENST00000523427 PUS7LQ9H0K6 701 aaKnown RBP31.13■■■□□ 2.57
PVT1-219ENST00000523427 TTYH1Q9H313 450 aaPredicted RBP31.13■■■□□ 2.57
PVT1-219ENST00000523427 ZNF214Q9UL59 606 aaPredicted RBP31.13■■■□□ 2.57
PVT1-219ENST00000523427 CNPY2Q9Y2B0 182 aa31.13■■■□□ 2.57
PVT1-219ENST00000523427 A0A1W2PQ45 241 aaPredicted RBP31.12■■■□□ 2.57
PVT1-219ENST00000523427 A0A1W2PQY0 241 aa31.12■■■□□ 2.57
PVT1-219ENST00000523427 ZNF865P0CJ78 1059 aaPredicted RBP31.12■■■□□ 2.57
PVT1-219ENST00000523427 AKR1A1P14550 325 aa31.12■■■□□ 2.57
PVT1-219ENST00000523427 SMAD3P84022 425 aaKnown RBP31.12■■■□□ 2.57
PVT1-219ENST00000523427 UBE3CQ15386 1083 aa31.12■■■□□ 2.57
PVT1-219ENST00000523427 ZBTB40Q9NUA8 1239 aa31.12■■■□□ 2.57
PVT1-219ENST00000523427 DDX19BQ9UMR2 479 aa31.12■■■□□ 2.57
PVT1-219ENST00000523427 COL11A1P12107 1806 aaPredicted RBP31.12■■■□□ 2.57
PVT1-219ENST00000523427 TMEM39AQ9NV64 488 aa31.11■■■□□ 2.57
PVT1-219ENST00000523427 DIS3Q9Y2L1 958 aaKnown RBP31.11■■■□□ 2.57
PVT1-219ENST00000523427 REPS2Q8NFH8 660 aa31.1■■■□□ 2.57
PVT1-219ENST00000523427 DDX11Q96FC9 970 aa31.1■■■□□ 2.57
PVT1-219ENST00000523427 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.1■■■□□ 2.57
PVT1-219ENST00000523427 SMARCA5O60264 1052 aaPredicted RBP31.09■■■□□ 2.57
PVT1-219ENST00000523427 SNRNP48Q6IEG0 339 aaKnown RBP31.09■■■□□ 2.57
PVT1-219ENST00000523427 CPXCR1Q8N123 301 aa31.09■■■□□ 2.57
PVT1-219ENST00000523427 SLF1Q9BQI6 1058 aa31.09■■■□□ 2.57
PVT1-219ENST00000523427 ZHX1Q9UKY1 873 aaPredicted RBP31.09■■■□□ 2.57
PVT1-219ENST00000523427 PARP14Q460N5 1801 aa31.09■■■□□ 2.57
PVT1-219ENST00000523427 ZBED9Q6R2W3 1325 aa31.08■■■□□ 2.57
PVT1-219ENST00000523427 MINDY4BA8MYZ0 360 aa31.08■■■□□ 2.57
PVT1-219ENST00000523427 FOSL2P15408 326 aa31.08■■■□□ 2.57
PVT1-219ENST00000523427 COPB2P35606 906 aa31.08■■■□□ 2.57
PVT1-219ENST00000523427 ZSCAN25Q6NSZ9 544 aa31.08■■■□□ 2.57
PVT1-219ENST00000523427 MKNK2Q9HBH9 465 aa31.08■■■□□ 2.57
PVT1-219ENST00000523427 STARD7Q9NQZ5 370 aa31.08■■■□□ 2.57
PVT1-219ENST00000523427 RIPK3Q9Y572 518 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms