RNA–Protein interactions for RNA: ENST00000523208.5

CD74-209, Transcript of CD74 molecule, humanhuman

TSL 5

Gene CD74, Length 767 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-209ENST00000523208 CCDC144CPQ8IYA2 1237 aa13.54□□□□□ -0.24
CD74-209ENST00000523208 SMCR8Q8TEV9 937 aaPredicted RBP13.54□□□□□ -0.24
CD74-209ENST00000523208 PARK7Q99497 189 aaKnown RBP13.54□□□□□ -0.24
CD74-209ENST00000523208 TM6SF1Q9BZW5 370 aa13.54□□□□□ -0.24
CD74-209ENST00000523208 ZSWIM6Q9HCJ5 1215 aa13.54□□□□□ -0.24
CD74-209ENST00000523208 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
CD74-209ENST00000523208 PDRG1Q9NUG6 133 aa13.54□□□□□ -0.24
CD74-209ENST00000523208 GOLGA8AA7E2F4 631 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 DDAH1O94760 285 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 GOLGA8HP0CJ92 632 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 CYP2C8P10632 490 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 BMP3P12645 472 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 NOVP48745 357 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 EXOSC10Q01780 885 aaKnown RBP13.53□□□□□ -0.24
CD74-209ENST00000523208 PABPC4Q13310 644 aaKnown RBP eCLIP13.53□□□□□ -0.24
CD74-209ENST00000523208 APOA5Q6Q788 366 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 CATIPQ7Z7H3 387 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 IGDCC4Q8TDY8 1250 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 DCAF4Q8WV16 495 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 PTPN18Q99952 460 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
CD74-209ENST00000523208 FBXO28Q9NVF7 368 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 PNMA3Q9UL41 463 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 SYNPO2Q9UMS6 1093 aa13.53□□□□□ -0.24
CD74-209ENST00000523208 MCM3APO60318 1980 aa13.52□□□□□ -0.24
CD74-209ENST00000523208 DOCK3Q8IZD9 2030 aa13.52□□□□□ -0.24
CD74-209ENST00000523208 TESPA1A2RU30 521 aaPredicted RBP13.52□□□□□ -0.25
CD74-209ENST00000523208 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.25
CD74-209ENST00000523208 MAP2K2P36507 400 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 NEK4P51957 841 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 AK2P54819 239 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 TOB2Q14106 344 aaPredicted RBP13.52□□□□□ -0.25
CD74-209ENST00000523208 GRM4Q14833 912 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 RABEP1Q15276 862 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 MKL1Q969V6 931 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 GMCL1Q96IK5 515 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 TTC14Q96N46 770 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 KIF2CQ99661 725 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 MTA3Q9BTC8 594 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 PAGR1Q9BTK6 254 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 ASCC2Q9H1I8 757 aaPredicted RBP13.52□□□□□ -0.25
CD74-209ENST00000523208 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 SLC12A7Q9Y666 1083 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 MYH15Q9Y2K3 1946 aa13.52□□□□□ -0.25
CD74-209ENST00000523208 ADGRA2Q96PE1 1338 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 SPDYE16A6NNV3 312 aaPredicted RBP13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 TMEM232C9JQI7 657 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
CD74-209ENST00000523208 PARP1P09874 1014 aaKnown RBP13.51□□□□□ -0.25
CD74-209ENST00000523208 OSBPP22059 807 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 LIFRP42702 1097 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 STAT2P52630 851 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 CRHR2Q13324 411 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 OTUD7BQ6GQQ9 843 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 CTCFLQ8NI51 663 aaPredicted RBP13.51□□□□□ -0.25
CD74-209ENST00000523208 ANKS1AQ92625 1134 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 KIFC2Q96AC6 838 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 ATG4CQ96DT6 458 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 SLF1Q9BQI6 1058 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
CD74-209ENST00000523208 FRMPD3Q5JV73 1810 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 NID2Q14112 1375 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 ZBTB43O43298 467 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 LARGE1O95461 756 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 SLC16A2P36021 539 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 METAP2P50579 478 aaKnown RBP eCLIP13.5□□□□□ -0.25
CD74-209ENST00000523208 HERVK_113P62684 666 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 STK3Q13188 491 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 RTN1Q16799 776 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 TTBK2Q6IQ55 1244 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 SYNE3Q6ZMZ3 975 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 BEGAINQ9BUH8 593 aa13.5□□□□□ -0.25
CD74-209ENST00000523208 CNTNAP5Q8WYK1 1306 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 PEX10O60683 326 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 TRPA1O75762 1119 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 TAL1P17542 331 aaPredicted RBP13.49□□□□□ -0.25
CD74-209ENST00000523208 TM4SF4P48230 202 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 INHBEP58166 350 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 SYDE2Q5VT97 1194 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
CD74-209ENST00000523208 STAG2Q8N3U4 1231 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 AGXT2Q9BYV1 514 aa13.49□□□□□ -0.25
CD74-209ENST00000523208 ZCCHC17Q9NP64 241 aaKnown RBP13.49□□□□□ -0.25
CD74-209ENST00000523208 CPA4Q9UI42 421 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms