RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CFAP100Q494V2 611 aa7.89□□□□□ -1.15
PABPC1-220ENST00000522658 ARSJQ5FYB0 599 aaPredicted RBP7.89□□□□□ -1.15
PABPC1-220ENST00000522658 HABP4Q5JVS0 413 aaKnown RBP7.89□□□□□ -1.15
PABPC1-220ENST00000522658 CD163Q86VB7 1156 aa7.89□□□□□ -1.15
PABPC1-220ENST00000522658 VPS37DQ86XT2 251 aa7.89□□□□□ -1.15
PABPC1-220ENST00000522658 ZFYVE28Q9HCC9 887 aa7.89□□□□□ -1.15
PABPC1-220ENST00000522658 TMOD2Q9NZR1 351 aa7.89□□□□□ -1.15
PABPC1-220ENST00000522658 KHNYNO15037 678 aaKnown RBP7.88□□□□□ -1.15
PABPC1-220ENST00000522658 FRAT2O75474 233 aaPredicted RBP7.88□□□□□ -1.15
PABPC1-220ENST00000522658 FURINP09958 794 aa7.88□□□□□ -1.15
PABPC1-220ENST00000522658 CHRNA4P43681 627 aa7.88□□□□□ -1.15
PABPC1-220ENST00000522658 CHRNDQ07001 517 aa7.88□□□□□ -1.15
PABPC1-220ENST00000522658 CRHR2Q13324 411 aa7.88□□□□□ -1.15
PABPC1-220ENST00000522658 TAF1CQ15572 869 aaPredicted RBP7.88□□□□□ -1.15
PABPC1-220ENST00000522658 TWISTNBQ3B726 338 aaPredicted RBP7.88□□□□□ -1.15
PABPC1-220ENST00000522658 ZDHHC1Q8WTX9 485 aa7.88□□□□□ -1.15
PABPC1-220ENST00000522658 CD209Q9NNX6 404 aa7.88□□□□□ -1.15
PABPC1-220ENST00000522658 CNNM1Q9NRU3 951 aa7.88□□□□□ -1.15
PABPC1-220ENST00000522658 PTPN22Q9Y2R2 807 aa7.88□□□□□ -1.15
PABPC1-220ENST00000522658 PLIN1O60240 522 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 IGKV5-2P06315 115 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 ZNF853P0CG23 659 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 GTF2A2P52657 109 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 EPHA4P54764 986 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 MAP3K11Q16584 847 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 CCDC57Q2TAC2 916 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 LDLRAD1Q5T700 205 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 ZNF468Q5VIY5 522 aaPredicted RBP7.87□□□□□ -1.15
PABPC1-220ENST00000522658 C8orf58Q8NAV2 365 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 DNAAF4Q8WXU2 420 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 OPTNQ96CV9 577 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 HOOK2Q96ED9 719 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 CLMNQ96JQ2 1002 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 MDFIQ99750 246 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 ALG2Q9H553 416 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 ELP3Q9H9T3 547 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 NOP53Q9NZM5 478 aaKnown RBP7.87□□□□□ -1.15
PABPC1-220ENST00000522658 SCHIP1Q9P0W5 487 aaPredicted RBP7.87□□□□□ -1.15
PABPC1-220ENST00000522658 FZD1Q9UP38 647 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 COG6Q9Y2V7 657 aa7.87□□□□□ -1.15
PABPC1-220ENST00000522658 CCL15-CCL14A0A0B4J2E2 113 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 IGF2BP3O00425 579 aaKnown RBP eCLIP7.86□□□□□ -1.152e-9■■■■■ 27.6
PABPC1-220ENST00000522658 LZTS3O60299 673 aaPredicted RBP7.86□□□□□ -1.15
PABPC1-220ENST00000522658 KLRK1P26718 216 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 TXLNAP40222 546 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 FLIIQ13045 1269 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 LAMC2Q13753 1193 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 GCKRQ14397 625 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 RASA3Q14644 834 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 CCL15Q16663 113 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 EML3Q32P44 896 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 TXNRD3Q86VQ6 643 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 TSR2Q969E8 191 aaKnown RBP7.86□□□□□ -1.15
PABPC1-220ENST00000522658 R3HDMLQ9H3Y0 253 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 JAG2Q9Y219 1238 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 ECM29Q5VYK3 1845 aa7.86□□□□□ -1.15
PABPC1-220ENST00000522658 TCP10L2B9ZVM9 353 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 BACH1O14867 736 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 TAF5LO75529 589 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 EN2P19622 333 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-220ENST00000522658 ZEB1P37275 1124 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-220ENST00000522658 PCBP4P57723 403 aaKnown RBP7.85□□□□□ -1.15
PABPC1-220ENST00000522658 FKBP1AP62942 108 aaKnown RBP7.85□□□□□ -1.15
PABPC1-220ENST00000522658 TEAD4Q15561 434 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 MFSD14BQ5SR56 506 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 NBPF12Q5TAG4 269 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-220ENST00000522658 LDHAL6AQ6ZMR3 332 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 LINS1Q8NG48 757 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 ARMC5Q96C12 935 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 TRIM11Q96F44 468 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 PLA2G12BQ9BX93 195 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 ZNF358Q9NW07 568 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 MARK1Q9P0L2 795 aa7.85□□□□□ -1.15
PABPC1-220ENST00000522658 TTF2Q9UNY4 1162 aaKnown RBP7.85□□□□□ -1.15
PABPC1-220ENST00000522658 MAST3O60307 1309 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 WTIPA6NIX2 430 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-220ENST00000522658 EML1O00423 815 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 SKIP12755 728 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 ITGB7P26010 798 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 HOXD10P28358 340 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 CHAF1AQ13111 956 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-220ENST00000522658 CAVIN4Q5BKX8 364 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 DCAF15Q66K64 600 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 TSPYL6Q8N831 410 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
PABPC1-220ENST00000522658 ZBED3Q96IU2 234 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-220ENST00000522658 C9orf78Q9NZ63 289 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-220ENST00000522658 BIN2Q9UBW5 565 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-220ENST00000522658 SERPINA10Q9UK55 444 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 NOD1Q9Y239 953 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 PTCH2Q9Y6C5 1203 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 RBBP6Q7Z6E9 1792 aaKnown RBP7.84□□□□□ -1.15
PABPC1-220ENST00000522658 SSC5DA1L4H1 1573 aa7.84□□□□□ -1.15
PABPC1-220ENST00000522658 CETPP11597 493 aa7.83□□□□□ -1.16
PABPC1-220ENST00000522658 IL1R1P14778 569 aa7.83□□□□□ -1.16
PABPC1-220ENST00000522658 HIBADHP31937 336 aaKnown RBP7.83□□□□□ -1.16
PABPC1-220ENST00000522658 NOS2P35228 1153 aa7.83□□□□□ -1.16
PABPC1-220ENST00000522658 SNAPC2Q13487 334 aa7.83□□□□□ -1.16
PABPC1-220ENST00000522658 NCOA4Q13772 614 aa7.83□□□□□ -1.16
PABPC1-220ENST00000522658 VGLL4Q14135 290 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms