RNA–Protein interactions for RNA: ENST00000522327.1

UBR5-213, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 3

Gene UBR5, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-213ENST00000522327 NPLOC4Q8TAT6 608 aa11.16□□□□□ -0.62
UBR5-213ENST00000522327 NECAB3Q96P71 396 aaPredicted RBP11.16□□□□□ -0.62
UBR5-213ENST00000522327 FEZ1Q99689 392 aa11.16□□□□□ -0.62
UBR5-213ENST00000522327 PRDM12Q9H4Q4 367 aa11.16□□□□□ -0.62
UBR5-213ENST00000522327 PQBP1O60828 265 aaKnown RBP11.15□□□□□ -0.62
UBR5-213ENST00000522327 CIAO1O76071 339 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 IGFBP4P22692 258 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 JAG1P78504 1218 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 LRRC41Q15345 812 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 ZYXQ15942 572 aaKnown RBP11.15□□□□□ -0.62
UBR5-213ENST00000522327 USP17L2Q6R6M4 530 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 DPP9Q86TI2 863 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 TMEM39AQ9NV64 488 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 PI4KBQ9UBF8 816 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 ZBTB21Q9ULJ3 1066 aa11.15□□□□□ -0.62
UBR5-213ENST00000522327 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 KIAA0355O15063 1070 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 LDHCP07864 332 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 IL15P40933 162 aaPredicted RBP11.14□□□□□ -0.63
UBR5-213ENST00000522327 KCNC4Q03721 635 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 PTGDRQ13258 359 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 SHROOM1Q2M3G4 852 aaPredicted RBP11.14□□□□□ -0.63
UBR5-213ENST00000522327 FAM47AQ5JRC9 791 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 WDR63Q8IWG1 891 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 NOL10Q9BSC4 688 aaKnown RBP11.14□□□□□ -0.63
UBR5-213ENST00000522327 PBX4Q9BYU1 374 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 DHX36Q9H2U1 1008 aaKnown RBP11.14□□□□□ -0.63
UBR5-213ENST00000522327 GINM1Q9NU53 330 aa11.14□□□□□ -0.63
UBR5-213ENST00000522327 SALL2Q9Y467 1007 aaPredicted RBP11.14□□□□□ -0.63
UBR5-213ENST00000522327 DOCK3Q8IZD9 2030 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 RGS20O76081 388 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 ADORA2AP29274 412 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 SMYD5Q6GMV2 418 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 CCDC174Q6PII3 467 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 SH3RF3Q8TEJ3 882 aaPredicted RBP11.13□□□□□ -0.63
UBR5-213ENST00000522327 ZNF384Q8TF68 577 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
UBR5-213ENST00000522327 LRFN3Q9BTN0 628 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 DNAJC18Q9H819 358 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 RAI14Q9P0K7 980 aa11.13□□□□□ -0.63
UBR5-213ENST00000522327 FRMPD3Q5JV73 1810 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 MYH13Q9UKX3 1938 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 ADGRE1Q14246 886 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 AAK1Q2M2I8 961 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 MICALL1Q8N3F8 863 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 SLC44A5Q8NCS7 719 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 C12orf42Q96LP6 360 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.633e-6■■■■■ 29.7
UBR5-213ENST00000522327 USP44Q9H0E7 712 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 CXXC1Q9P0U4 656 aaPredicted RBP11.12□□□□□ -0.63
UBR5-213ENST00000522327 BTBD7Q9P203 1132 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 PHF24Q9UPV7 400 aa11.12□□□□□ -0.63
UBR5-213ENST00000522327 A0A1W2PQ45 241 aaPredicted RBP11.11□□□□□ -0.63
UBR5-213ENST00000522327 A0A1W2PQY0 241 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 DCDC2CA8MYV0 355 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 RNF40O75150 1001 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 GH2P01242 217 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 IGHA2P01877 340 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 RARBP10826 455 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 VCAM1P19320 739 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 SLC4A3P48751 1232 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 USP14P54578 494 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 MVPQ14764 893 aaKnown RBP11.11□□□□□ -0.63
UBR5-213ENST00000522327 TMEM31Q5JXX7 168 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 LBX2Q6XYB7 198 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 CATSPERGQ6ZRH7 1159 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 RNF180Q86T96 592 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 FOXP4Q8IVH2 680 aaPredicted RBP11.11□□□□□ -0.63
UBR5-213ENST00000522327 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
UBR5-213ENST00000522327 FLT1P17948 1338 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 GRXCR1A8MXD5 290 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 BAG3O95817 575 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 HLA-DOAP06340 250 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 BMP1P13497 986 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 TIMM10P62072 90 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 TFF2Q03403 129 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.638e-7■■■□□ 15.7
UBR5-213ENST00000522327 SKIV2LQ15477 1246 aaKnown RBP11.1□□□□□ -0.63
UBR5-213ENST00000522327 RAB30Q15771 203 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 PRAMEF19Q5SWL8 479 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 METTL16Q86W50 562 aaKnown RBP11.1□□□□□ -0.63
UBR5-213ENST00000522327 TGFBRAP1Q8WUH2 860 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 XAGE2Q96GT9 111 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 HMG20BQ9P0W2 317 aa11.1□□□□□ -0.63
UBR5-213ENST00000522327 PA2G4Q9UQ80 394 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms