RNA–Protein interactions for RNA: ENST00000521691.5

SREK1-210, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 3

Gene SREK1, Length 580 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-210	ENST00000521691	CHMP4BP1	P59074	171 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	CHRNE	Q04844	493 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	SNW1	Q13573	536 aa	Known RBP	4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	CLEC16A	Q2KHT3	1053 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	TMC3	Q7Z5M5	1100 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	OXR1	Q8N573	874 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	ANKS4B	Q8N8V4	417 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	RASGRP4	Q8TDF6	673 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	MYLIP	Q8WY64	445 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	SLC6A18	Q96N87	628 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	SLC9A7	Q96T83	725 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	EBF1	Q9UH73	591 aa		4.93	□□□□□ -1.62
SREK1-210	ENST00000521691	TMEM82	A0PJX8	343 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	BTBD11	A6QL63	1104 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	PRAMEF1	O95521	474 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	TSPAN15	O95858	294 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	TRIM26	Q12899	539 aa	Predicted RBP	4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	DUSP4	Q13115	394 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	MLANA	Q16655	118 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	BBS9	Q3SYG4	887 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	USHBP1	Q8N6Y0	703 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	LINC00116	Q8NCU8	138 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	MRRF	Q96E11	262 aa	Known RBP	4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	TCTN2	Q96GX1	697 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	SPATA32	Q96LK8	384 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	TM9SF2	Q99805	663 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	PRDM14	Q9GZV8	571 aa		4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	SUCO	Q9UBS9	1254 aa	Known RBP	4.92	□□□□□ -1.62
SREK1-210	ENST00000521691	SHOX	O15266	292 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	GJA8	P48165	433 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	SOX9	P48436	509 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	SNX17	Q15036	470 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	TIGD5	Q53EQ6	642 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	MPZL3	Q6UWV2	235 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	PRR23B	Q6ZRT6	265 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	CILP2	Q8IUL8	1156 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	KSR1	Q8IVT5	923 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	ZNF654	Q8IZM8	581 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	RGS22	Q8NE09	1264 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	SMARCC1	Q92922	1105 aa	Predicted RBP	4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	PPP1R16B	Q96T49	567 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	RNF32	Q9H0A6	362 aa		4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	CWC22	Q9HCG8	908 aa	Known RBP	4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.91	□□□□□ -1.62
SREK1-210	ENST00000521691	DBX1	A6NMT0	343 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	NOTO	A8MTQ0	251 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	KRT1	P04264	644 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	KIR2DL1	P43626	348 aa	Predicted RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	KIR2DL2	P43627	348 aa	Predicted RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	PMS1	P54277	932 aa	Known RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	PCBP3	P57721	371 aa	Known RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	HDLBP	Q00341	1268 aa	Known RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	PAK2	Q13177	524 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	LSR	Q86X29	649 aa	Predicted RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	IRF2BP1	Q8IU81	584 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	SPPL2C	Q8IUH8	684 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	SYTL4	Q96C24	671 aa	Predicted RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	SHISA4	Q96DD7	197 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	DHRS1	Q96LJ7	313 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	FERD3L	Q96RJ6	166 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	SLC38A3	Q99624	504 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	MKRN2	Q9H000	416 aa	Known RBP	4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	TCFL5	Q9UL49	500 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691	PCDHB12	Q9Y5F1	795 aa		4.9	□□□□□ -1.63
SREK1-210	ENST00000521691		C9IYK1	514 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	ENDOU	P21128	410 aa	Known RBP	4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	GUCY2C	P25092	1073 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	BMP8B	P34820	402 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	FZD5	Q13467	585 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	AUH	Q13825	339 aa	Known RBP	4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	PKN1	Q16512	942 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	ANKRD39	Q53RE8	183 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	PPFIBP1	Q86W92	1011 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	MAP6	Q96JE9	813 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	FCRL2	Q96LA5	508 aa	Predicted RBP	4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	FOXP3	Q9BZS1	431 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	SLC6A17	Q9H1V8	727 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	CHST7	Q9NS84	486 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	PPT2	Q9UMR5	302 aa		4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	YBX2	Q9Y2T7	364 aa	Known RBP	4.89	□□□□□ -1.63
SREK1-210	ENST00000521691	UNCX	A6NJT0	531 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	NRDC	O43847	1150 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	ZNF205	O95201	554 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	MED14OS	P0DP75	135 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	TRHR	P34981	398 aa	Predicted RBP	4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	CTSK	P43235	329 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	ZNF124	Q15973	351 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	NLRX1	Q86UT6	975 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	C7orf61	Q8IZ16	206 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	C19orf47	Q8N9M1	422 aa	Known RBP	4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	GPRASP2	Q96D09	838 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	INTS4	Q96HW7	963 aa	Known RBP	4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	EPB41L4B	Q9H329	900 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	NSUN3	Q9H649	340 aa	Known RBP	4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	C19orf44	Q9H6X5	657 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	GINM1	Q9NU53	330 aa		4.88	□□□□□ -1.63
SREK1-210	ENST00000521691	GFOD1	Q9NXC2	390 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms