RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 USP17L10C9JJH3 530 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 KLRF2D3W0D1 207 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 GOLGA8HP0CJ92 632 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 BMP3P12645 472 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 DDIT3P35638 169 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 IKQ13123 557 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-208ENST00000520561 MTMR2Q13614 643 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 TRIM29Q14134 588 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-208ENST00000520561 CMTR1Q8N1G2 835 aaKnown RBP10.38□□□□□ -0.75
CSMD1-208ENST00000520561 STAG2Q8N3U4 1231 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 CCDC82Q8N4S0 544 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 SRBD1Q8N5C6 995 aaKnown RBP10.38□□□□□ -0.75
CSMD1-208ENST00000520561 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 LPAR1Q92633 364 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 SPZ1Q9BXG8 430 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 KIAA1683Q9H0B3 1180 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 GBA2Q9HCG7 927 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-208ENST00000520561 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
CSMD1-208ENST00000520561 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-208ENST00000520561 WDR33Q9C0J8 1336 aaKnown RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 VPS37CA5D8V6 355 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 UNCXA6NJT0 531 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 TRIM75PA6NK02 468 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 C19orf81C9J6K1 198 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 H3BQV1 296 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 WDR46O15213 610 aaKnown RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 PRPF3O43395 683 aaKnown RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 DTNBO60941 627 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 CELF2O95319 508 aaKnown RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 XBP1P17861 261 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 SMARCA1P28370 1054 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 FOSBP53539 338 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 SPP2Q13103 211 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 IFFO2Q5TF58 517 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 LARP1BQ659C4 914 aaKnown RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 MOB2Q70IA6 237 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 KCTD1Q719H9 257 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 ERO1BQ86YB8 467 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 SPICE1Q8N0Z3 855 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 C2orf69Q8N8R5 385 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 SMC1BQ8NDV3 1235 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 RBM46Q8TBY0 533 aaKnown RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 RRP36Q96EU6 259 aaKnown RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 C8orf76Q96K31 380 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 ALG1Q9BT22 464 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 ELP3Q9H9T3 547 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 TMOD4Q9NZQ9 345 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 SEC63Q9UGP8 760 aaKnown RBP10.37□□□□□ -0.75
CSMD1-208ENST00000520561 ZHX2Q9Y6X8 837 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 PHIPQ8WWQ0 1821 aa10.37□□□□□ -0.75
CSMD1-208ENST00000520561 TRPM7Q96QT4 1865 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 SPDYE5A6NIY4 337 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 UBE2Q2LH0YL09 131 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 STX6O43752 255 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 FDPSP14324 419 aaKnown RBP10.36□□□□□ -0.75
CSMD1-208ENST00000520561 SYT1P21579 422 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 STAT2P52630 851 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 BACE1P56817 501 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 PPATQ06203 517 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 FUT2Q10981 343 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 FAM160B2Q86V87 743 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 HOMER1Q86YM7 354 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 OTUD5Q96G74 571 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 CLMNQ96JQ2 1002 aa10.36□□□□□ -0.75
CSMD1-208ENST00000520561 NUP88Q99567 741 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-208ENST00000520561 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-208ENST00000520561 MYH6P13533 1939 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 TMEM232C9JQI7 657 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 hCG_1984214I3L0E3 225 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 KIF3CO14782 793 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 SCG2P13521 617 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 VCAM1P19320 739 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 YY1P25490 414 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 HMGCS2P54868 508 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 FMR1Q06787 632 aaKnown RBP eCLIP10.35□□□□□ -0.75
CSMD1-208ENST00000520561 PPIL2Q13356 520 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 PFKFB3Q16875 520 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-208ENST00000520561 LDLRAD1Q5T700 205 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 SYDE2Q5VT97 1194 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 TTBK2Q6IQ55 1244 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 ZNF713Q8N859 430 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-208ENST00000520561 RGS22Q8NE09 1264 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 CHURC1Q8WUH1 139 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 PIBF1Q8WXW3 757 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 C12orf42Q96LP6 360 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 TANGO6Q9C0B7 1094 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 UBA5Q9GZZ9 404 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 RIOX1Q9H6W3 641 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 FEM1BQ9UK73 627 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 AFG3L2Q9Y4W6 797 aa10.35□□□□□ -0.75
CSMD1-208ENST00000520561 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 hCG_1642624A0A1W2PR95 340 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 CXCL11O14625 94 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 CYTH3O43739 400 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 BRD1O95696 1058 aa10.34□□□□□ -0.75
CSMD1-208ENST00000520561 ITGBL1O95965 494 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms