RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 METAP2P50579 478 aaKnown RBP eCLIP20.76■□□□□ 0.91
SDC2-205ENST00000520233 ZNF543Q08ER8 600 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 MOGSQ13724 837 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 ME3Q16798 604 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 ASPRV1Q53RT3 343 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 GPATCH4Q5T3I0 446 aaKnown RBP20.76■□□□□ 0.91
SDC2-205ENST00000520233 GADL1Q6ZQY3 521 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 PAXIP1Q6ZW49 1069 aaPredicted RBP20.76■□□□□ 0.91
SDC2-205ENST00000520233 SH2B1Q9NRF2 756 aaPredicted RBP20.76■□□□□ 0.91
SDC2-205ENST00000520233 MAD2L2Q9UI95 211 aa20.76■□□□□ 0.91
SDC2-205ENST00000520233 PALM3A6NDB9 673 aaPredicted RBP20.75■□□□□ 0.91
SDC2-205ENST00000520233 MANSC4A6NHS7 340 aaPredicted RBP20.75■□□□□ 0.91
SDC2-205ENST00000520233 PFKFB2O60825 505 aa20.75■□□□□ 0.91
SDC2-205ENST00000520233 RTN1Q16799 776 aa20.75■□□□□ 0.91
SDC2-205ENST00000520233 CCDC96Q2M329 555 aa20.75■□□□□ 0.91
SDC2-205ENST00000520233 FAM83BQ5T0W9 1011 aa20.75■□□□□ 0.91
SDC2-205ENST00000520233 CYP4F22Q6NT55 531 aa20.75■□□□□ 0.91
SDC2-205ENST00000520233 RASGRP2Q7LDG7 609 aa20.75■□□□□ 0.91
SDC2-205ENST00000520233 CCDC144CPQ8IYA2 1237 aa20.75■□□□□ 0.91
SDC2-205ENST00000520233 SLKQ9H2G2 1235 aaPredicted RBP20.75■□□□□ 0.91
SDC2-205ENST00000520233 RBM28Q9NW13 759 aaKnown RBP20.75■□□□□ 0.91
SDC2-205ENST00000520233 CCL15-CCL14A0A0B4J2E2 113 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 CCDC196A0A1B0GTZ2 297 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 TESPA1A2RU30 521 aaPredicted RBP20.74■□□□□ 0.91
SDC2-205ENST00000520233 LARGE1O95461 756 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 STK3Q13188 491 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 CCL15Q16663 113 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 KCTD1Q719H9 257 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 CHMP4CQ96CF2 233 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 CAPNS2Q96L46 248 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 NUP88Q99567 741 aaPredicted RBP20.74■□□□□ 0.91
SDC2-205ENST00000520233 RPAP3Q9H6T3 665 aaPredicted RBP20.74■□□□□ 0.91
SDC2-205ENST00000520233 FAM217BQ9NTX9 383 aaPredicted RBP20.74■□□□□ 0.91
SDC2-205ENST00000520233 AGTPBP1Q9UPW5 1226 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 PTPRFP10586 1907 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 LOC285556D6RIA3 1793 aa20.74■□□□□ 0.91
SDC2-205ENST00000520233 FRMPD2Q68DX3 1309 aaPredicted RBP20.74■□□□□ 0.91
SDC2-205ENST00000520233 PLA2G6O60733 806 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 GOLGA8HP0CJ92 632 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 HSPA6P17066 643 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 CDC27P30260 824 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 GNAQP50148 359 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 INHBEP58166 350 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 CCT2P78371 535 aaKnown RBP20.73■□□□□ 0.91
SDC2-205ENST00000520233 NOGQ13253 232 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 GPAT2Q6NUI2 795 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 STAG2Q8N3U4 1231 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 BRI3BPQ8WY22 251 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 TMX3Q96JJ7 454 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 GPCPD1Q9NPB8 672 aa20.73■□□□□ 0.91
SDC2-205ENST00000520233 USP17L15C9J2P7 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 USP17L13C9JLJ4 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 TMEM232C9JQI7 657 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 USP17L11C9JVI0 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 KLRF2D3W0D1 207 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 USP17L18D6R9N7 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 USP17L22D6RA61 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 USP17L17D6RBQ6 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 USP17L19D6RCP7 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 USP17L20D6RJB6 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 K7ELQ4 463 aaPredicted RBP20.72■□□□□ 0.91
SDC2-205ENST00000520233 HOXA7P31268 230 aaPredicted RBP20.72■□□□□ 0.91
SDC2-205ENST00000520233 USP17L24Q0WX57 530 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 SCRN1Q12765 414 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 TREML2Q5T2D2 321 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 BTNL9Q6UXG8 535 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 CATSPERGQ6ZRH7 1159 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 ANKRD23Q86SG2 305 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 HSCBQ8IWL3 235 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 GTF3C6Q969F1 213 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 LZTS2Q9BRK4 669 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 NCOA5Q9HCD5 579 aaKnown RBP20.72■□□□□ 0.91
SDC2-205ENST00000520233 FEM1BQ9UK73 627 aa20.72■□□□□ 0.91
SDC2-205ENST00000520233 ISY1Q9ULR0 285 aaKnown RBP20.72■□□□□ 0.91
SDC2-205ENST00000520233 DHX16O60231 1041 aaKnown RBP20.71■□□□□ 0.91
SDC2-205ENST00000520233 SMARCA1P28370 1054 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 ADD1P35611 737 aaKnown RBP20.71■□□□□ 0.91
SDC2-205ENST00000520233 HTRA3P83110 453 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 GRM1Q13255 1194 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 PABPC4Q13310 644 aaKnown RBP eCLIP20.71■□□□□ 0.91
SDC2-205ENST00000520233 TTBK2Q6IQ55 1244 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 TMTC3Q6ZXV5 915 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 FAM160B2Q86V87 743 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 NECAB1Q8N987 351 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 CHURC1Q8WUH1 139 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 TANGO6Q9C0B7 1094 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 SLC45A1Q9Y2W3 748 aa20.71■□□□□ 0.91
SDC2-205ENST00000520233 BTBD19C9JJ37 291 aa20.7■□□□□ 0.9
SDC2-205ENST00000520233 STAT2P52630 851 aa20.7■□□□□ 0.9
SDC2-205ENST00000520233 SREBF2Q12772 1141 aa20.7■□□□□ 0.9
SDC2-205ENST00000520233 RBM19Q9Y4C8 960 aaKnown RBP20.7■□□□□ 0.9
SDC2-205ENST00000520233 CPLX1O14810 134 aa20.69■□□□□ 0.9
SDC2-205ENST00000520233 PLEKHA8P1O95397 391 aa20.69■□□□□ 0.9
SDC2-205ENST00000520233 KIF23Q02241 960 aaPredicted RBP20.69■□□□□ 0.9
SDC2-205ENST00000520233 ST3GAL1Q11201 340 aa20.69■□□□□ 0.9
SDC2-205ENST00000520233 IKQ13123 557 aaPredicted RBP20.69■□□□□ 0.9
SDC2-205ENST00000520233 CPLX2Q6PUV4 134 aaKnown RBP20.69■□□□□ 0.9
SDC2-205ENST00000520233 REM2Q8IYK8 340 aaPredicted RBP20.69■□□□□ 0.9
SDC2-205ENST00000520233 SRBD1Q8N5C6 995 aaKnown RBP20.69■□□□□ 0.9
SDC2-205ENST00000520233 PTPN18Q99952 460 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms