RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 PRDM10Q9NQV6 1147 aa7.5□□□□□ -1.21
HMGB1P46-201ENST00000520062 RAB11FIP3O75154 756 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 NFICP08651 508 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 FAM209AQ5JX71 171 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 SEZ6L2Q6UXD5 910 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 ARHGEF39Q8N4T4 335 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 PPP1R14AQ96A00 147 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 MRGPRX3Q96LB0 322 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 METTL14Q9HCE5 456 aaKnown RBP7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 SUGT1Q9Y2Z0 365 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 EMC9Q9Y3B6 208 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 PCDHB12Q9Y5F1 795 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 FHOD1Q9Y613 1164 aa7.49□□□□□ -1.21
HMGB1P46-201ENST00000520062 APBA3O96018 575 aa7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 PABPC1P11940 636 aaKnown RBP7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 CYP7A1P22680 504 aa7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 L1CAMP32004 1257 aa7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 NBPF9Q3BBW0 867 aa7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 ALYREFQ86V81 257 aaKnown RBP7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 TRIM59Q8IWR1 403 aa7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 RPUSD2Q8IZ73 545 aaKnown RBP7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 SYTL5Q8TDW5 730 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 FBLIM1Q8WUP2 373 aa7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 WFDC12Q8WWY7 111 aa7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 ZNF775Q96BV0 537 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 MYRFLQ96LU7 910 aa7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 UBL7Q96S82 380 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 INTS7Q9NVH2 962 aaKnown RBP7.48□□□□□ -1.21
HMGB1P46-201ENST00000520062 WIPF1O43516 503 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 KCNQ2O43526 872 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 NOS3P29474 1203 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 GRB10Q13322 594 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 ADGRE1Q14246 886 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 SGO2Q562F6 1265 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 YOD1Q5VVQ6 348 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 NSMFQ6X4W1 530 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 CDH24Q86UP0 819 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 DZIP1LQ8IYY4 767 aaKnown RBP7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 RIN3Q8TB24 985 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 OSBP2Q969R2 916 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 TYW1Q9NV66 732 aaKnown RBP7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 CGGBP1Q9UFW8 167 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 AKT3Q9Y243 479 aa7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 DIS3Q9Y2L1 958 aaKnown RBP7.47□□□□□ -1.21
HMGB1P46-201ENST00000520062 STAT3P40763 770 aa7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 ZNF445P59923 1031 aa7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 CBX2Q14781 532 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 TRIM61Q5EBN2 209 aa7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 THNSL2Q86YJ6 484 aa7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 GIMAP7Q8NHV1 300 aa7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 CHAC2Q8WUX2 184 aa7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 UTP4Q969X6 686 aaKnown RBP7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 CCDC140Q96MF4 163 aa7.46□□□□□ -1.22
HMGB1P46-201ENST00000520062 FAM95CA0A1B0GW59 222 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 PRODHO43272 600 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 RAPGEF3O95398 923 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 MYCLP1P12525 358 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 MAP4P27816 1152 aaKnown RBP7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 IREB2P48200 963 aaKnown RBP7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 MBTPS1Q14703 1052 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 NOL9Q5SY16 702 aaKnown RBP7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 FAM20CQ8IXL6 584 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 CAAP1Q9H8G2 361 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 C1GALT1Q9NS00 363 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 MAGEC2Q9UBF1 373 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 FBXL21Q9UKT6 434 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 MAPRE3Q9UPY8 281 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 CNTNAP5Q8WYK1 1306 aa7.45□□□□□ -1.22
HMGB1P46-201ENST00000520062 A0A087X0B3 334 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 IRS4O14654 1257 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 DYNC1LI2O43237 492 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 TBX1O43435 398 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 EOMESO95936 686 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 BMP3P12645 472 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 SOX5P35711 763 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 GRIA2P42262 883 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 KIR3DL1P43629 444 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 MAP4K2Q12851 820 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 C21orf62-AS1Q17RA5 79 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 GPAT2Q6NUI2 795 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 PAOXQ6QHF9 649 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 ARMC10Q8N2F6 343 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 TOP6BLQ8N6T0 577 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 ADCY4Q8NFM4 1077 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 SCARF2Q96GP6 870 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 IER2Q9BTL4 223 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 DUSP23Q9BVJ7 150 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 PRDM14Q9GZV8 571 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 DDX56Q9NY93 547 aaKnown RBP7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 SFMBT1Q9UHJ3 866 aa7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 SF3B6Q9Y3B4 125 aaKnown RBP7.44□□□□□ -1.22
HMGB1P46-201ENST00000520062 PDE8AO60658 829 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 EFCAB14O75071 495 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 SCG5P05408 212 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 RXRBP28702 533 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 HOXC12P31275 282 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 GABREP78334 506 aa7.43□□□□□ -1.22
HMGB1P46-201ENST00000520062 CDK5R2Q13319 367 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms